Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 2
- plastid 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G182000.1 | Wheat | peroxisome | 98.57 | 98.57 |
| TraesCS5A01G183600.1 | Wheat | peroxisome | 97.99 | 97.99 |
| EER96576 | Sorghum | cytosol | 78.22 | 76.47 |
| Os09t0325700-01 | Rice | cytosol | 77.94 | 75.98 |
| Zm00001d005609_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 75.64 | 75.43 |
| KXG35986 | Sorghum | cytosol, peroxisome, plastid | 42.41 | 72.91 |
| Zm00001d020100_P001 | Maize | mitochondrion, nucleus, peroxisome, plastid | 74.5 | 72.63 |
| GSMUA_AchrUn_... | Banana | cytosol | 49.86 | 61.48 |
| CDY18067 | Canola | cytosol | 9.17 | 54.24 |
| GSMUA_Achr6P15180_001 | Banana | cytosol | 56.73 | 53.51 |
| TraesCS3D01G355900.1 | Wheat | plastid | 58.17 | 51.13 |
| AT2G29380.1 | Thale cress | nucleus | 52.15 | 50.28 |
| Bra018398.1-P | Field mustard | cytosol | 51.58 | 49.18 |
| CDY67227 | Canola | cytosol | 52.15 | 49.06 |
| CDY45436 | Canola | cytosol | 51.29 | 48.91 |
| CDY40181 | Canola | cytosol | 51.29 | 48.91 |
| CDY67257 | Canola | nucleus | 51.86 | 48.79 |
| TraesCS4D01G210900.1 | Wheat | nucleus | 57.31 | 48.78 |
| VIT_06s0004g05460.t01 | Wine grape | nucleus | 53.87 | 47.84 |
| Bra002038.1-P | Field mustard | nucleus | 51.86 | 47.63 |
| KRH73525 | Soybean | cytosol, mitochondrion, peroxisome, plastid | 14.33 | 47.17 |
| CDY06705 | Canola | nucleus | 51.86 | 46.41 |
| AT3G11410.1 | Thale cress | cytosol | 53.01 | 46.37 |
| VIT_13s0019g02200.t01 | Wine grape | plastid | 53.01 | 46.25 |
| CDY08530 | Canola | nucleus | 51.58 | 45.8 |
| CDY01017 | Canola | nucleus | 51.58 | 45.8 |
| KRG97855 | Soybean | cytosol | 51.86 | 45.25 |
| Bra034845.1-P | Field mustard | nucleus | 51.58 | 45.11 |
| KRH31027 | Soybean | cytosol | 51.29 | 44.64 |
| KRH15068 | Soybean | cytosol | 51.0 | 44.5 |
| PGSC0003DMT400077989 | Potato | cytosol | 51.86 | 44.15 |
| AT5G59220.1 | Thale cress | nucleus | 51.86 | 43.83 |
| Solyc05g052980.2.1 | Tomato | nucleus | 51.29 | 43.77 |
| Bra002594.1-P | Field mustard | plastid | 51.58 | 43.69 |
| Solyc03g096670.2.1 | Tomato | nucleus | 50.72 | 43.6 |
| PGSC0003DMT400069947 | Potato | cytosol | 52.15 | 43.54 |
| TraesCS1D01G419000.1 | Wheat | nucleus | 46.99 | 43.5 |
| Solyc06g076400.2.1 | Tomato | nucleus | 51.0 | 43.41 |
| CDY33008 | Canola | nucleus, plastid | 49.0 | 43.29 |
| KRH73067 | Soybean | cytosol | 50.14 | 43.0 |
| CDY10275 | Canola | nucleus | 52.72 | 42.79 |
| Bra015579.1-P | Field mustard | nucleus | 52.15 | 42.72 |
| CDX80307 | Canola | nucleus, plastid | 48.42 | 42.68 |
| PGSC0003DMT400043146 | Potato | nucleus | 49.57 | 42.2 |
| TraesCS3D01G238000.1 | Wheat | cytosol, nucleus, plastid | 48.14 | 42.0 |
| AT1G07430.1 | Thale cress | nucleus | 53.01 | 41.86 |
| Bra031574.1-P | Field mustard | nucleus | 51.86 | 41.51 |
| CDY06259 | Canola | nucleus | 51.58 | 41.28 |
| TraesCS7D01G042600.1 | Wheat | cytosol | 36.1 | 36.73 |
| TraesCS3D01G249000.1 | Wheat | cytosol | 38.97 | 35.88 |
| TraesCS1D01G363500.1 | Wheat | cytosol | 39.26 | 35.86 |
| Bra030455.1-P | Field mustard | cytosol | 16.33 | 35.85 |
| TraesCS1D01G449700.1 | Wheat | cytosol | 40.69 | 34.63 |
| TraesCS7D01G042300.1 | Wheat | cytosol | 36.68 | 34.59 |
| TraesCS2D01G000300.1 | Wheat | cytosol | 44.41 | 34.14 |
| CDY36606 | Canola | nucleus | 22.92 | 32.0 |
| TraesCS3D01G212100.1 | Wheat | peroxisome, plasma membrane, vacuole | 42.12 | 30.88 |
| TraesCS3D01G153200.1 | Wheat | nucleus, peroxisome, plastid | 28.37 | 28.21 |
| TraesCS3D01G153000.1 | Wheat | peroxisome | 21.49 | 24.51 |
| PGSC0003DMT400049695 | Potato | extracellular | 2.58 | 8.18 |
| TraesCS7D01G390600.1 | Wheat | plasma membrane | 23.5 | 7.69 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.2.1 | Gene3D:3.60.40.10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004722 | GO:GO:0005488 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0043169 | InterPro:IPR001932 | InterPro:IPR036457 |
| PFAM:PF00481 | InterPro:PP2C | InterPro:PP2C_BS | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | ScanProsite:PS01032 |
| PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF518 | SMART:SM00331 | SMART:SM00332 | SUPFAM:SSF81606 |
| EnsemblPlantsGene:TraesCS5D01G188600 | EnsemblPlants:TraesCS5D01G188600.1 | TIGR:cd00143 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr5D:+:291084764..291085813
Molecular Weight (calculated)
37104.8 Da
IEP (calculated)
6.613
GRAVY (calculated)
-0.249
Length
349 amino acids
Sequence
(BLAST)
(BLAST)
001: MSMAQVCCDS ASSAVVVGAE AEARARARAG RRRRAGDAAA RWKVTAEAPQ GAEEAAATRK RRAAGGEGVP AKRHGFTSVA GRRREMEDAV SIREAFTVPA
101: EEGKPRRDFY GVFDGHGCSH VADACRDRMH ELVAEELAGA AQPESWTGAM ERSFARMDAE VTASGGGDSA SCRCEANKCD HVGSTAVVAV VGEQRVLVAN
201: CGDSRAVLCR DGAPVVLSSD HKPDRPDELE RIEAAGGRVI FWEGARVLGV LAMSRAIGDG YLKPFVTAVP EVTVTDRAAG DECLILASDG LWDVVNNETA
301: CEVARACLRR GRDRWCAEAA AMLTKLALTK NSSDNISVVV VDLRPRNHL
101: EEGKPRRDFY GVFDGHGCSH VADACRDRMH ELVAEELAGA AQPESWTGAM ERSFARMDAE VTASGGGDSA SCRCEANKCD HVGSTAVVAV VGEQRVLVAN
201: CGDSRAVLCR DGAPVVLSSD HKPDRPDELE RIEAAGGRVI FWEGARVLGV LAMSRAIGDG YLKPFVTAVP EVTVTDRAAG DECLILASDG LWDVVNNETA
301: CEVARACLRR GRDRWCAEAA AMLTKLALTK NSSDNISVVV VDLRPRNHL
001: MAEICYEVVT DACPSSVYES TPAHSRRRPR FQTVMHEDWE KNCKRSKQEA LATRYSSIPR SSREDFSDQN VDVSSPRYGV SSVCGRRREM EDAVAIHPSF
101: SSPKNSEFPQ HYFGVYDGHG CSHVAARCRE RLHKLVQEEL SSDMEDEEEW KTTMERSFTR MDKEVVSWGD SVVTANCKCD LQTPACDSVG STAVVSVITP
201: DKIVVANCGD SRAVLCRNGK PVPLSTDHKP DRPDELDRIE GAGGRVIYWD CPRVLGVLAM SRAIGDNYLK PYVSCEPEVT ITDRRDDDCL ILASDGLWDV
301: VSNETACSVA RMCLRGGGRR QDNEDPAISD KACTEASVLL TKLALARNSS DNVSVVVIDL RR
101: SSPKNSEFPQ HYFGVYDGHG CSHVAARCRE RLHKLVQEEL SSDMEDEEEW KTTMERSFTR MDKEVVSWGD SVVTANCKCD LQTPACDSVG STAVVSVITP
201: DKIVVANCGD SRAVLCRNGK PVPLSTDHKP DRPDELDRIE GAGGRVIYWD CPRVLGVLAM SRAIGDNYLK PYVSCEPEVT ITDRRDDDCL ILASDGLWDV
301: VSNETACSVA RMCLRGGGRR QDNEDPAISD KACTEASVLL TKLALARNSS DNVSVVVIDL RR
Arabidopsis Description
HAI3HAI3 [Source:UniProtKB/TrEMBL;Acc:A0A178VWK9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.