Factsheet for Bra018398.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45436	Canola	cytosol	98.36	98.36
CDY40181	Canola	cytosol	98.09	98.09
AT2G29380.1	Thale cress	nucleus	78.96	79.83
GSMUA_AchrUn_...	Banana	cytosol	46.72	60.42
KXG35986	Sorghum	cytosol, peroxisome, plastid	32.24	58.13
VIT_06s0004g05460.t01	Wine grape	nucleus	61.48	57.25
Bra015579.1-P	Field mustard	nucleus	64.75	55.63
Bra002594.1-P	Field mustard	plastid	60.93	54.13
Bra031574.1-P	Field mustard	nucleus	63.93	53.67
Solyc06g076400.2.1	Tomato	nucleus	59.56	53.17
Bra002038.1-P	Field mustard	nucleus	54.64	52.63
TraesCS5A01G183600.1	Wheat	peroxisome	49.73	52.15
Zm00001d005609_P001	Maize	cytosol, mitochondrion, nucleus, plastid	49.73	52.0
EER96576	Sorghum	cytosol	50.55	51.82
GSMUA_Achr6P15180_001	Banana	cytosol	52.19	51.62
TraesCS5D01G188600.1	Wheat	peroxisome	49.18	51.58
TraesCS5B01G182000.1	Wheat	peroxisome	48.91	51.29
Bra034845.1-P	Field mustard	nucleus	55.19	50.63
Os09t0325700-01	Rice	cytosol	49.45	50.56
Zm00001d020100_P001	Maize	mitochondrion, nucleus, peroxisome, plastid	49.45	50.56
GSMUA_Achr5P29000_001	Banana	cytosol	52.73	50.52
GSMUA_Achr11P...	Banana	cytosol	53.28	49.37
HORVU3Hr1G085930.3	Barley	nucleus, plastid	50.82	47.33
TraesCS3D01G355900.1	Wheat	plastid	50.82	46.85
Os01t0846300-01	Rice	cytosol, mitochondrion, nucleus, plastid	52.73	46.62
TraesCS3A01G362200.1	Wheat	nucleus, plastid	49.73	46.55
Os03t0268600-01	Rice	nucleus	51.37	46.53
Zm00001d028574_P001	Maize	nucleus	50.0	46.21
Zm00001d042886_P001	Maize	nucleus	51.37	46.08
Zm00001d012401_P001	Maize	cytosol, mitochondrion, nucleus, plastid	51.64	45.76
EES01744	Sorghum	plastid	51.37	45.63
TraesCS4B01G210100.1	Wheat	nucleus	49.73	44.83
HORVU4Hr1G060370.1	Barley	nucleus	48.91	44.75
TraesCS4D01G210900.1	Wheat	nucleus	49.73	44.39
EER92493	Sorghum	nucleus	48.63	44.39
TraesCS4A01G094300.1	Wheat	nucleus	49.18	44.01
TraesCS3B01G394600.3	Wheat	plastid	50.0	42.76
Bra030455.1-P	Field mustard	cytosol	18.31	42.14
KXG22152	Sorghum	nucleus	51.09	40.3
Bra029160.1-P	Field mustard	cytosol	41.53	36.36
Bra016595.1-P	Field mustard	cytosol	39.07	34.88
Bra019121.1-P	Field mustard	cytosol	39.34	34.87
Bra010441.1-P	Field mustard	cytosol	39.89	34.6
Bra013945.1-P	Field mustard	cytosol	39.89	34.35
Bra002766.1-P	Field mustard	cytosol	38.52	33.41
Bra016034.1-P	Field mustard	cytosol, peroxisome, plastid	38.8	29.34
Bra025964.1-P	Field mustard	cytosol	38.8	27.95
PGSC0003DMT400049695	Potato	extracellular	3.01	10.0
Bra040446.1-P	Field mustard	plasma membrane, vacuole	20.77	7.18

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.1	Gene3D:3.60.40.10	EnsemblPlantsGene:Bra018398	EnsemblPlants:Bra018398.1
EnsemblPlants:Bra018398.1-P	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722
GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457
UniProt:M4DPF7	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF518	SMART:SM00332	SUPFAM:SSF81606
UniParc:UPI0002547D71	SEG:seg	:	:	:	:

Description

AT2G29380 (E=4e-144) | protein phosphatase 2C, putative / PP2C, putative

Coordinates

chrA05:-:7966849..7968522

Molecular Weight (calculated)

40945.2 Da

IEP (calculated)

5.486

GRAVY (calculated)

-0.510

Length

366 amino acids

Sequence
(BLAST)

001: MADICYEVLT DASAYESRPL HSGRRQRFPM DKTVAMQEEW EKKNFKRNKL EALTVRNENV SDESPVTEAS PRYGVSSVCG RRREMEDAVA IHPSFSSHSE
101: YPQHYFGVYD GHGCSHVAAR CRERLHKLVQ EELNSDREEE EDEWRNTMER SFTRMDKEVV LLSESVVSAN CKCELQTPDC DAVGSTAVVS IITQDKIVVA
201: NCGDSRAVLC RNGKPFPLST DHKPDRPDEL DRIEGAGGRV IYWDCPRVLG VLAMSRAIGD NYLKPYVTCE PEVTVTDRTD DDCLILASDG LWDVVSNETA
301: CSVARMCLSG GRRRRGTPEQ AVETISDKAC MEASVLLTKL ALARHSSDNV SVVVIDLRRK GHVTGH

Best Arabidopsis Sequence Match ( AT2G29380.1 )
(BLAST)

001: MAEICYEVVT DACPSSVYES TPAHSRRRPR FQTVMHEDWE KNCKRSKQEA LATRYSSIPR SSREDFSDQN VDVSSPRYGV SSVCGRRREM EDAVAIHPSF
101: SSPKNSEFPQ HYFGVYDGHG CSHVAARCRE RLHKLVQEEL SSDMEDEEEW KTTMERSFTR MDKEVVSWGD SVVTANCKCD LQTPACDSVG STAVVSVITP
201: DKIVVANCGD SRAVLCRNGK PVPLSTDHKP DRPDELDRIE GAGGRVIYWD CPRVLGVLAM SRAIGDNYLK PYVSCEPEVT ITDRRDDDCL ILASDGLWDV
301: VSNETACSVA RMCLRGGGRR QDNEDPAISD KACTEASVLL TKLALARNSS DNVSVVVIDL RR

Arabidopsis Description

HAI3HAI3 [Source:UniProtKB/TrEMBL;Acc:A0A178VWK9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.