Factsheet for Bra015579.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra010783.1-P
Bra029592.1-P
Bra032037.1-P
Bra032374.1-P
Bra040280.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G07430.1	Bra010783.1-P	AT1G30270.1	17898163
AT1G07430.1	Bra032374.1-P	AT1G30270.1	17898163
AT1G07430.1	Bra032037.1-P	AT2G26650.1	17898163
AT1G07430.1	Bra029592.1-P	AT3G06610.1	21798944
AT1G07430.1	Bra040280.1-P	AT3G06610.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06705	Canola	nucleus	90.61	98.97
Bra031574.1-P	Field mustard	nucleus	83.57	81.65
AT1G07430.1	Thale cress	nucleus	81.22	78.28
Bra018398.1-P	Field mustard	cytosol	55.63	64.75
GSMUA_AchrUn_...	Banana	cytosol	40.85	61.48
KXG35986	Sorghum	cytosol, peroxisome, plastid	28.17	59.11
Bra030455.1-P	Field mustard	cytosol	21.6	57.86
Bra002594.1-P	Field mustard	plastid	53.29	55.1
Bra002038.1-P	Field mustard	nucleus	49.06	55.0
VIT_06s0004g05460.t01	Wine grape	nucleus	50.23	54.45
Solyc06g076400.2.1	Tomato	nucleus	51.17	53.17
TraesCS5A01G183600.1	Wheat	peroxisome	43.43	53.01
TraesCS5B01G182000.1	Wheat	peroxisome	43.19	52.72
GSMUA_Achr5P29000_001	Banana	cytosol	47.18	52.62
Zm00001d005609_P001	Maize	cytosol, mitochondrion, nucleus, plastid	42.96	52.29
GSMUA_Achr6P15180_001	Banana	cytosol	45.31	52.16
TraesCS5D01G188600.1	Wheat	peroxisome	42.72	52.15
Bra034845.1-P	Field mustard	nucleus	48.59	51.88
EER96576	Sorghum	cytosol	43.43	51.82
Os09t0325700-01	Rice	cytosol	43.43	51.68
GSMUA_Achr11P...	Banana	cytosol	47.89	51.65
Zm00001d020100_P001	Maize	mitochondrion, nucleus, peroxisome, plastid	42.25	50.28
TraesCS3D01G355900.1	Wheat	plastid	46.01	49.37
HORVU3Hr1G085930.3	Barley	nucleus, plastid	45.31	49.11
TraesCS3A01G362200.1	Wheat	nucleus, plastid	45.07	49.1
Os03t0268600-01	Rice	nucleus	45.77	48.27
Zm00001d042886_P001	Maize	nucleus	46.01	48.04
HORVU4Hr1G060370.1	Barley	nucleus	45.07	48.0
Zm00001d028574_P001	Maize	nucleus	44.6	47.98
Os01t0846300-01	Rice	cytosol, mitochondrion, nucleus, plastid	46.24	47.58
EES01744	Sorghum	plastid	45.77	47.33
TraesCS4B01G210100.1	Wheat	nucleus	45.07	47.29
TraesCS4A01G094300.1	Wheat	nucleus	45.31	47.19
EER92493	Sorghum	nucleus	44.37	47.13
Zm00001d012401_P001	Maize	cytosol, mitochondrion, nucleus, plastid	45.54	46.97
TraesCS4D01G210900.1	Wheat	nucleus	45.07	46.83
TraesCS3B01G394600.3	Wheat	plastid	45.07	44.86
KXG22152	Sorghum	nucleus	43.9	40.3
Bra029160.1-P	Field mustard	cytosol	35.92	36.6
Bra019121.1-P	Field mustard	cytosol	34.51	35.59
Bra016595.1-P	Field mustard	cytosol	34.04	35.37
Bra013945.1-P	Field mustard	cytosol	35.21	35.29
Bra010441.1-P	Field mustard	cytosol	34.74	35.07
Bra002766.1-P	Field mustard	cytosol	34.27	34.6
Bra025964.1-P	Field mustard	cytosol	34.98	29.33
Bra016034.1-P	Field mustard	cytosol, peroxisome, plastid	33.1	29.13
PGSC0003DMT400049695	Potato	extracellular	3.05	11.82
Bra040446.1-P	Field mustard	plasma membrane, vacuole	19.72	7.93

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.1	Gene3D:3.60.40.10	EnsemblPlantsGene:Bra015579	EnsemblPlants:Bra015579.1
EnsemblPlants:Bra015579.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	UniProt:M4DGF5
PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF518	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0002544D7F
SEG:seg	:	:	:	:	:

Description

AT1G07430 (E=3e-153) | protein phosphatase 2C, putative / PP2C, putative

Coordinates

chrA10:+:898108..899556

Molecular Weight (calculated)

47784.2 Da

IEP (calculated)

6.101

GRAVY (calculated)

-0.702

Length

426 amino acids

Sequence
(BLAST)

001: MADICYDDEP SWSNRRRRIG VHRCRISPSE MQQTAVEDSE GVYKRNKQEE NDIMNCASSP SRSSPDSEAE ESVLLDVEIT RDDVDAGEDS SVIPSKKTAR
101: ETDPRPRYGA ASVCGRRRDM EDAVAIHPSF VRKQTEFSRA KWHYFGVYDG HGCSQVATRC KERLHEIVQE EALSDRKEEW KKMMERSFTR MDNEVVRWGE
201: TVMSANCRCE LQTPDCDAVG STAVVSVITP EKIIVANCGD SRAVLCRNGK PVPLSTDHKP DRPDELYRIE EAGGRVIYWD GPRVLGVLAM SRAIGDNYLK
301: PYVSSEPEVT VTDRTEEDEF LILASDGLWD VVTNEAACAM VHMYLSKRGG RGGGRRRETK ECGEGKEEEE KVVVGSKKSG KKGEISDRAC TEASVLLTKL
401: ALAKHSSDNV SVVVIDLRRR KKRHVS

Best Arabidopsis Sequence Match ( AT1G07430.1 )
(BLAST)

001: MADICYEDET SACESRPLWS SRKWRIGVQR FRMSPSEMNP TASTTEEEDK SEGIYNKRNK QEEYDFMNCA SSSPSQSSPE EESVSLEDSD VSISDGNSSV
101: NDVAVIPSKK TVKETDLRPR YGVASVCGRR RDMEDAVALH PSFVRKQTEF SRTRWHYFGV YDGHGCSHVA ARCKERLHEL VQEEALSDKK EEWKKMMERS
201: FTRMDKEVVR WGETVMSANC RCELQTPDCD AVGSTAVVSV ITPEKIIVAN CGDSRAVLCR NGKAVPLSTD HKPDRPDELD RIQEAGGRVI YWDGARVLGV
301: LAMSRAIGDN YLKPYVTSEP EVTVTDRTEE DEFLILATDG LWDVVTNEAA CTMVRMCLNR KSGRGRRRGE TQTPGRRSEE EGKEEEEKVV GSRKNGKRGE
401: ITDKACTEAS VLLTKLALAK HSSDNVSVVV IDLRRRRKRH VA

Arabidopsis Description

AIP1Protein phosphatase 2C 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.