Factsheet for Bra034845.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000052.1-P
Bra007772.1-P
Bra008064.1-P
Bra012635.1-P
Bra013262.1-P
Bra013599.1-P
Bra017526.1-P
Bra021032.1-P
Bra021864.1-P
Bra024995.1-P
Bra025048.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G11410.1	Bra008064.1-P	AT1G73000.1	19407142
AT3G11410.1	Bra007772.1-P	AT2G26040.1	19407142
AT3G11410.1	Bra021864.1-P	AT2G33610.1	19033529
AT3G11410.1	Bra000052.1-P	AT2G38310.1	19407142
AT3G11410.1	Bra012635.1-P	AT4G17870.1	19407142
AT3G11410.1	Bra013262.1-P	AT4G17870.1	19407142
AT3G11410.1	Bra021032.1-P	AT4G17870.1	19407142
AT3G11410.1	Bra013599.1-P	AT4G22200.1	11181729
AT3G11410.1	Bra013599.1-P	AT4G22200.1	12034902
AT3G11410.1	Bra025048.1-P	AT5G45870.1	19407142
AT3G11410.1	Bra017526.1-P	AT5G46790.1	19407142
AT3G11410.1	Bra024995.1-P	AT5G46790.1	19407142

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08530	Canola	nucleus	94.24	95.67
CDY01017	Canola	nucleus	93.73	95.17
Bra002038.1-P	Field mustard	nucleus	84.46	88.68
AT3G11410.1	Thale cress	cytosol	83.46	83.46
Solyc05g052980.2.1	Tomato	nucleus	62.66	61.12
GSMUA_AchrUn_...	Banana	cytosol	42.61	60.07
PGSC0003DMT400069947	Potato	cytosol	62.91	60.05
VIT_13s0019g02200.t01	Wine grape	plastid	59.15	59.0
KXG35986	Sorghum	cytosol, peroxisome, plastid	29.07	57.14
Solyc03g096670.2.1	Tomato	nucleus	57.14	56.16
PGSC0003DMT400043146	Potato	nucleus	57.14	55.61
Bra018398.1-P	Field mustard	cytosol	50.63	55.19
KRH73525	Soybean	cytosol, mitochondrion, peroxisome, plastid	14.29	53.77
Zm00001d005609_P001	Maize	cytosol, mitochondrion, nucleus, plastid	46.87	53.43
TraesCS5A01G183600.1	Wheat	peroxisome	45.86	52.44
GSMUA_Achr6P15180_001	Banana	cytosol	48.62	52.43
EER96576	Sorghum	cytosol	46.62	52.1
Os09t0325700-01	Rice	cytosol	46.62	51.96
Bra002594.1-P	Field mustard	plastid	53.63	51.94
TraesCS5D01G188600.1	Wheat	peroxisome	45.11	51.58
GSMUA_Achr5P29000_001	Banana	cytosol	49.37	51.57
GSMUA_Achr11P...	Banana	cytosol	50.88	51.39
TraesCS5B01G182000.1	Wheat	peroxisome	44.86	51.29
Zm00001d020100_P001	Maize	mitochondrion, nucleus, peroxisome, plastid	45.86	51.12
HORVU4Hr1G060370.1	Barley	nucleus	50.13	50.0
TraesCS3D01G355900.1	Wheat	plastid	49.62	49.87
TraesCS3A01G362200.1	Wheat	nucleus, plastid	48.87	49.87
HORVU3Hr1G085930.3	Barley	nucleus, plastid	48.87	49.62
TraesCS4B01G210100.1	Wheat	nucleus	50.13	49.26
EER92493	Sorghum	nucleus	48.87	48.63
Bra015579.1-P	Field mustard	nucleus	51.88	48.59
TraesCS4D01G210900.1	Wheat	nucleus	49.87	48.54
Zm00001d028574_P001	Maize	nucleus	48.12	48.48
Os03t0268600-01	Rice	nucleus	48.62	48.02
Os01t0846300-01	Rice	cytosol, mitochondrion, nucleus, plastid	49.62	47.83
TraesCS4A01G094300.1	Wheat	nucleus	48.62	47.43
EES01744	Sorghum	plastid	48.87	47.33
Zm00001d042886_P001	Maize	nucleus	48.37	47.3
Zm00001d012401_P001	Maize	cytosol, mitochondrion, nucleus, plastid	48.87	47.22
Bra031574.1-P	Field mustard	nucleus	50.38	46.1
TraesCS3B01G394600.3	Wheat	plastid	49.37	46.03
KXG22152	Sorghum	nucleus	48.12	41.38
Bra030455.1-P	Field mustard	cytosol	16.29	40.88
Bra016595.1-P	Field mustard	cytosol	38.35	37.32
Bra019121.1-P	Field mustard	cytosol	37.84	36.56
Bra013945.1-P	Field mustard	cytosol	38.35	36.0
Bra010441.1-P	Field mustard	cytosol	37.84	35.78
Bra029160.1-P	Field mustard	cytosol	36.84	35.17
Bra002766.1-P	Field mustard	cytosol	37.09	35.07
Bra016034.1-P	Field mustard	cytosol, peroxisome, plastid	37.09	30.58
Bra025964.1-P	Field mustard	cytosol	38.1	29.92
Bra040446.1-P	Field mustard	plasma membrane, vacuole	21.3	8.03

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.1	Gene3D:3.60.40.10	EnsemblPlantsGene:Bra034845	EnsemblPlants:Bra034845.1
EnsemblPlants:Bra034845.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	UniProt:M4F199
PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF518	SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606
UniParc:UPI0002547641	SEG:seg	:	:	:	:

Description

AT3G11410 (E=8e-152) ATPP2CA, AHG3, PP2CA | PP2CA (ARABIDOPSIS THALIANA PROTEIN PHOSPHATASE 2CA); protein binding / protein serine/threonine phosphatase

Coordinates

chrA05:+:21695139..21696426

Molecular Weight (calculated)

43115.6 Da

IEP (calculated)

6.659

GRAVY (calculated)

-0.425

Length

399 amino acids

Sequence
(BLAST)

001: MAGICCGVVG ESEPTVTVDS STRASLRRRL DLLPSIKIVA PPLESSRKRQ KRETPSPASG NQDLESNVRS DRKARSSPVK NSNSIPSSAT EAESSFVSDA
101: PKIGTTSVCG RRRDMEDAVS VHHSLIHKNS ENLHFYGVFD GHGCSHVAEK CRERLHEIVK HEVEAMASDN EWKETMAKSF QKMDREVSQR DSNNGAASRN
201: SVKSSCRCEL QSPQCDAVGS TAVVSVVTPE KIVVSNCGDS RAVLCRNGVA IPLSSDHKPD RPDELIRIQQ AGGRVIYWDG ARVLGVLAMS RAIGDNYLKP
301: YVIPDPEVTV TDRTDDDECL ILASDGLWDV VTNETACGVA RMCLQGAAAA DGGDSDTVHN ACSDASLLLT KLALARQSSD NVSVVVVDLR KRRSNNQVS

Best Arabidopsis Sequence Match ( AT3G11410.1 )
(BLAST)

001: MAGICCGVVG ETEPAAPVDS TSRASLRRRL DLLPSIKIVA DSAVAPPLEN CRKRQKRETV VLSTLPGNLD LDSNVRSENK KARSAVTNSN SVTEAESFFS
101: DVPKIGTTSV CGRRRDMEDA VSIHPSFLQR NSENHHFYGV FDGHGCSHVA EKCRERLHDI VKKEVEVMAS DEWTETMVKS FQKMDKEVSQ RECNLVVNGA
201: TRSMKNSCRC ELQSPQCDAV GSTAVVSVVT PEKIIVSNCG DSRAVLCRNG VAIPLSVDHK PDRPDELIRI QQAGGRVIYW DGARVLGVLA MSRAIGDNYL
301: KPYVIPDPEV TVTDRTDEDE CLILASDGLW DVVPNETACG VARMCLRGAG AGDDSDAAHN ACSDAALLLT KLALARQSSD NVSVVVVDLR KRRNNQASS

Arabidopsis Description

PP2CAProtein phosphatase 2C 37 [Source:UniProtKB/Swiss-Prot;Acc:P49598]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.