CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 2
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER88529
EER92405
EER93155
EES03354
EES04686
EES06532
EES19575
EES19683
KXG22060
KXG22062
KXG22064
OQU87775
OQU88438
OQU92088

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G07430.1	OQU88438	AT1G30270.1	17898163
AT1G07430.1	EES03354	AT2G26650.1	17898163
AT1G07430.1	EER93155	AT3G06610.1	21798944
AT3G11410.1	EER88529	AT1G73000.1	19407142
AT3G11410.1	EES06532	AT1G73000.1	19407142
AT3G11410.1	EER88529	AT2G26040.1	19407142
AT3G11410.1	EES06532	AT2G26040.1	19407142
AT3G11410.1	EES04686	AT2G33610.1	19033529
AT3G11410.1	EER92405	AT2G38310.1	19407142
AT3G11410.1	EES19683	AT2G38310.1	19407142
AT3G11410.1	OQU87775	AT2G38310.1	19407142
AT3G11410.1	OQU92088	AT4G17870.1	19407142
AT3G11410.1	EES19575	AT4G22200.1	11181729
AT3G11410.1	KXG22060	AT4G22200.1	11181729
AT3G11410.1	KXG22062	AT4G22200.1	11181729
AT3G11410.1	KXG22064	AT4G22200.1	11181729
AT3G11410.1	EES19575	AT4G22200.1	12034902
AT3G11410.1	KXG22060	AT4G22200.1	12034902
AT3G11410.1	KXG22062	AT4G22200.1	12034902
AT3G11410.1	KXG22064	AT4G22200.1	12034902
AT3G11410.1	OQU92088	AT5G46790.1	19407142
AT5G59220.1	EER92405	AT2G38310.1	19407142
AT5G59220.1	EES19683	AT2G38310.1	19407142
AT5G59220.1	OQU87775	AT2G38310.1	19407142
AT5G59220.1	OQU92088	AT4G17870.1	19407142

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012401_P001	Maize	cytosol, mitochondrion, nucleus, plastid	91.99	91.77
TraesCS3A01G362200.1	Wheat	nucleus, plastid	74.76	78.77
HORVU3Hr1G085930.3	Barley	nucleus, plastid	73.54	77.1
TraesCS3D01G355900.1	Wheat	plastid	73.54	76.32
Os01t0846300-01	Rice	cytosol, mitochondrion, nucleus, plastid	74.76	74.4
TraesCS3B01G394600.3	Wheat	plastid	74.51	71.73
GSMUA_AchrUn_...	Banana	cytosol	45.63	66.43
GSMUA_Achr6P15180_001	Banana	cytosol	56.8	63.24
KXG35986	Sorghum	cytosol, peroxisome, plastid	30.58	62.07
KXG22152	Sorghum	nucleus	67.48	59.91
CDY18067	Canola	cytosol	8.5	59.32
EER96576	Sorghum	cytosol	51.21	59.1
EER92493	Sorghum	nucleus	53.64	55.11
AT2G29380.1	Thale cress	nucleus	47.09	53.59
CDY67257	Canola	nucleus	47.82	53.1
CDY67227	Canola	cytosol	47.33	52.56
Bra002038.1-P	Field mustard	nucleus	48.06	52.11
KRG97855	Soybean	cytosol	50.0	51.5
Bra018398.1-P	Field mustard	cytosol	45.63	51.37
CDY40181	Canola	cytosol	45.63	51.37
CDY45436	Canola	cytosol	45.63	51.37
KRH15068	Soybean	cytosol	49.76	51.25
Solyc05g052980.2.1	Tomato	nucleus	50.73	51.1
VIT_06s0004g05460.t01	Wine grape	nucleus	48.54	50.89
KRH31027	Soybean	cytosol	49.51	50.87
KRH73067	Soybean	cytosol	50.24	50.86
VIT_13s0019g02200.t01	Wine grape	plastid	48.79	50.25
AT3G11410.1	Thale cress	cytosol	48.3	49.87
CDY01017	Canola	nucleus	47.33	49.62
CDY08530	Canola	nucleus	47.33	49.62
PGSC0003DMT400069947	Potato	cytosol	50.0	49.28
Solyc03g096670.2.1	Tomato	nucleus	48.54	49.26
CDY06705	Canola	nucleus	46.36	48.97
Bra034845.1-P	Field mustard	nucleus	47.33	48.87
PGSC0003DMT400043146	Potato	nucleus	48.3	48.54
Bra002594.1-P	Field mustard	plastid	47.33	47.33
KRH73525	Soybean	cytosol, mitochondrion, peroxisome, plastid	12.14	47.17
CDX80307	Canola	nucleus, plastid	44.9	46.72
CDY33008	Canola	nucleus, plastid	44.66	46.58
AT5G59220.1	Thale cress	nucleus	46.6	46.49
PGSC0003DMT400077989	Potato	cytosol	46.12	46.34
Bra015579.1-P	Field mustard	nucleus	47.33	45.77
Solyc06g076400.2.1	Tomato	nucleus	45.39	45.61
CDY10275	Canola	nucleus	47.09	45.12
AT1G07430.1	Thale cress	nucleus	47.57	44.34
OQU78453	Sorghum	nucleus	42.23	44.05
CDY06259	Canola	nucleus	46.36	43.81
Bra031574.1-P	Field mustard	nucleus	46.12	43.58
Bra030455.1-P	Field mustard	cytosol	15.78	40.88
KXG22422	Sorghum	cytosol, nucleus, plastid	34.22	37.11
KXG33023	Sorghum	nucleus	41.26	35.87
OQU87413	Sorghum	cytosol	33.25	35.77
EES11811	Sorghum	plastid	41.75	35.17
CDY36606	Canola	nucleus	20.63	34.0
KXG22681	Sorghum	cytosol	34.95	33.64
EES00964	Sorghum	peroxisome, plasma membrane, vacuole	36.16	30.91
OQU90183	Sorghum	mitochondrion	17.72	25.7
OQU86100	Sorghum	nucleus	16.26	16.79
PGSC0003DMT400049695	Potato	extracellular	3.88	14.55
KXG28797	Sorghum	golgi, plasma membrane, vacuole	22.33	8.62

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.1	Gene3D:3.60.40.10	EntrezGene:8058897	UniProt:C5XPR0
EnsemblPlants:EES01744	ProteinID:EES01744	ProteinID:EES01744.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721
GO:GO:0004722	GO:GO:0005488	GO:GO:0005575	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019538
GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C
InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832
PANTHER:PTHR13832:SF532	SMART:SM00332	EnsemblPlantsGene:SORBI_3003G354000	SUPFAM:SSF81606	unigene:Sbi.10674	TMHMM:TMhelix
UniParc:UPI0001A84511	RefSeq:XP_002456624.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:67273659..67275786

Molecular Weight (calculated)

43990.0 Da

IEP (calculated)

5.522

GRAVY (calculated)

-0.199

Length

412 amino acids

Sequence
(BLAST)

001: MAEICCEEAK STPATAVAAA SVSAAAAAVA VASSALERRR RRLEMRRFRV ATDPEAPVAE DVRATKRQRL LARTVSGSCP DAGSDSDRPA LPERLPRYGV
101: TSVCGRRREM EDMVSIRPDF LPGTSTQHFF GVFDGHGCSH VATLCQDMMH EVVADEHRKA GCGEETAWKG VMERSFARLD EQAASWATSR SRDEPACRCE
201: QQMPLRCDHV GSTAVVAVVS PTHVVVANAG DSRAVLSRAG VAVPLSVDHK PDRPDELARI EAAGGRVIYW DGARVLGVLA MSRAIGDGYL KPFVSSEPEV
301: TVTERTDDDE CLILASDGLW DVVTNEMACE VVRACFRSNG PPQAPAARPN GVAALPAADA DDENGPAVVK GVSKEDSDRA CSDAAMLLAK LALARRSADN
401: VSVVVVDLRR GI

Best Arabidopsis Sequence Match ( AT1G07430.1 )
(BLAST)

001: MADICYEDET SACESRPLWS SRKWRIGVQR FRMSPSEMNP TASTTEEEDK SEGIYNKRNK QEEYDFMNCA SSSPSQSSPE EESVSLEDSD VSISDGNSSV
101: NDVAVIPSKK TVKETDLRPR YGVASVCGRR RDMEDAVALH PSFVRKQTEF SRTRWHYFGV YDGHGCSHVA ARCKERLHEL VQEEALSDKK EEWKKMMERS
201: FTRMDKEVVR WGETVMSANC RCELQTPDCD AVGSTAVVSV ITPEKIIVAN CGDSRAVLCR NGKAVPLSTD HKPDRPDELD RIQEAGGRVI YWDGARVLGV
301: LAMSRAIGDN YLKPYVTSEP EVTVTDRTEE DEFLILATDG LWDVVTNEAA CTMVRMCLNR KSGRGRRRGE TQTPGRRSEE EGKEEEEKVV GSRKNGKRGE
401: ITDKACTEAS VLLTKLALAK HSSDNVSVVV IDLRRRRKRH VA

Arabidopsis Description

AIP1Protein phosphatase 2C 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.