Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0832300-01 | Rice | plasma membrane | 85.48 | 83.46 |
| GSMUA_Achr2P02080_001 | Banana | cytosol | 75.81 | 83.19 |
| TraesCS5B01G509900.1 | Wheat | cytosol | 83.06 | 80.47 |
| TraesCS4A01G363500.1 | Wheat | cytosol | 82.26 | 80.31 |
| TraesCS5D01G510000.1 | Wheat | cytosol | 82.26 | 79.69 |
| KRH11935 | Soybean | nucleus | 70.16 | 79.09 |
| VIT_05s0077g00910.t01 | Wine grape | cytosol | 69.35 | 78.18 |
| Solyc12g099240.1.1 | Tomato | cytosol | 69.35 | 78.18 |
| PGSC0003DMT400011768 | Potato | cytosol | 69.35 | 78.18 |
| KRH02360 | Soybean | nucleus | 69.35 | 78.18 |
| KRH50722 | Soybean | endoplasmic reticulum | 68.55 | 77.27 |
| KRH36967 | Soybean | cytosol | 66.94 | 75.45 |
| AT3G06610.1 | Thale cress | cytosol | 68.55 | 73.91 |
| Bra029592.1-P | Field mustard | cytosol | 66.13 | 71.3 |
| CDY34941 | Canola | cytosol | 66.13 | 71.3 |
| CDY34938 | Canola | cytosol | 66.13 | 71.3 |
| CDY24678 | Canola | cytosol | 66.13 | 71.3 |
| CDY05281 | Canola | cytosol | 66.13 | 71.3 |
| Bra040280.1-P | Field mustard | cytosol | 66.13 | 71.3 |
| HORVU5Hr1G116650.1 | Barley | mitochondrion | 82.26 | 68.0 |
| Zm00001d042829_P001 | Maize | cytosol | 33.06 | 47.13 |
| Zm00001d038949_P001 | Maize | cytosol | 32.26 | 46.51 |
Protein Annotations
| EnsemblPlants:EER93155 | EnsemblPlantsGene:SORBI_3001G025600 | EntrezGene:8080205 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005829 | InterPro:HYPK_UBA | ncoils:Coil | PANTHER:PTHR31184 | ProteinID:EER93155 |
| ProteinID:EER93155.1 | RefSeq:XP_002466157.1 | SEG:seg | unigene:Sbi.6293 | UniParc:UPI0001A82904 | UniProt:C5WU09 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:1992459..1995850
Molecular Weight (calculated)
13223.5 Da
IEP (calculated)
4.835
GRAVY (calculated)
-0.456
Length
124 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAAGDEKAA AAAGTGATAA EGEGAVDSKD LQQQSKALDK LTDHVEDRQL DSSRVQSAMA ALASSKEADW NAMRLREKEL AAVKINPTDV EIIANELELD
101: KKIAERTLRE HKGDAVAAVR FLLH
101: KKIAERTLRE HKGDAVAAVR FLLH
001: MEGAEEAGAE IAVDSKDLQQ QSKAFDKLTD RVEDRQLDSS RVQSAMASIA ASREADLNAK RLREKELASV KINPADVEFI VNELEIEKNV AERTLREHKG
101: DAVAATRQLL SRYPL
101: DAVAATRQLL SRYPL
Arabidopsis Description
DNA-binding enhancer protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q9C901]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.