CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 3
nucleus 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EER88529
EER92405
EER93155
EES03354
EES04686
EES06532
EES19575
EES19683
KXG22060
KXG22062
KXG22064
OQU87775
OQU88438
OQU92088

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G07430.1	OQU88438	AT1G30270.1	17898163
AT1G07430.1	EES03354	AT2G26650.1	17898163
AT1G07430.1	EER93155	AT3G06610.1	21798944
AT3G11410.1	EER88529	AT1G73000.1	19407142
AT3G11410.1	EES06532	AT1G73000.1	19407142
AT3G11410.1	EER88529	AT2G26040.1	19407142
AT3G11410.1	EES06532	AT2G26040.1	19407142
AT3G11410.1	EES04686	AT2G33610.1	19033529
AT3G11410.1	EER92405	AT2G38310.1	19407142
AT3G11410.1	EES19683	AT2G38310.1	19407142
AT3G11410.1	OQU87775	AT2G38310.1	19407142
AT3G11410.1	OQU92088	AT4G17870.1	19407142
AT3G11410.1	EES19575	AT4G22200.1	11181729
AT3G11410.1	KXG22060	AT4G22200.1	11181729
AT3G11410.1	KXG22062	AT4G22200.1	11181729
AT3G11410.1	KXG22064	AT4G22200.1	11181729
AT3G11410.1	EES19575	AT4G22200.1	12034902
AT3G11410.1	KXG22060	AT4G22200.1	12034902
AT3G11410.1	KXG22062	AT4G22200.1	12034902
AT3G11410.1	KXG22064	AT4G22200.1	12034902
AT3G11410.1	OQU92088	AT5G46790.1	19407142
AT5G59220.1	EER92405	AT2G38310.1	19407142
AT5G59220.1	EES19683	AT2G38310.1	19407142
AT5G59220.1	OQU87775	AT2G38310.1	19407142
AT5G59220.1	OQU92088	AT4G17870.1	19407142

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES01744	Sorghum	plastid	59.91	67.48
GSMUA_AchrUn_...	Banana	cytosol	39.66	65.02
CDY18067	Canola	cytosol	7.97	62.71
GSMUA_Achr6P15180_001	Banana	cytosol	47.63	59.73
KXG35986	Sorghum	cytosol, peroxisome, plastid	25.22	57.64
EER96576	Sorghum	cytosol	42.24	54.9
CDY67257	Canola	nucleus	42.89	53.64
AT2G29380.1	Thale cress	nucleus	41.16	52.76
CDY67227	Canola	cytosol	42.03	52.56
EER92493	Sorghum	nucleus	45.26	52.37
Bra002038.1-P	Field mustard	nucleus	42.67	52.11
Bra018398.1-P	Field mustard	cytosol	40.3	51.09
CDY40181	Canola	cytosol	40.3	51.09
CDY45436	Canola	cytosol	40.3	51.09
AT3G11410.1	Thale cress	cytosol	43.1	50.13
KRH15068	Soybean	cytosol	42.67	49.5
Solyc05g052980.2.1	Tomato	nucleus	43.32	49.14
CDY01017	Canola	nucleus	41.59	49.11
KRH73525	Soybean	cytosol, mitochondrion, peroxisome, plastid	11.21	49.06
VIT_06s0004g05460.t01	Wine grape	nucleus	41.38	48.85
KRH31027	Soybean	cytosol	42.03	48.63
CDY08530	Canola	nucleus	41.16	48.6
KRG97855	Soybean	cytosol	41.81	48.5
VIT_13s0019g02200.t01	Wine grape	plastid	41.59	48.25
Bra034845.1-P	Field mustard	nucleus	41.38	48.12
PGSC0003DMT400069947	Potato	cytosol	43.32	48.09
KRH73067	Soybean	cytosol	41.59	47.42
Bra002594.1-P	Field mustard	plastid	42.03	47.33
AT5G59220.1	Thale cress	nucleus	41.81	46.97
Solyc03g096670.2.1	Tomato	nucleus	40.95	46.8
CDY06705	Canola	nucleus	39.22	46.67
CDX80307	Canola	nucleus, plastid	39.66	46.46
CDY33008	Canola	nucleus, plastid	39.44	46.33
PGSC0003DMT400043146	Potato	nucleus	40.3	45.61
Solyc06g076400.2.1	Tomato	nucleus	39.44	44.63
PGSC0003DMT400077989	Potato	cytosol	39.44	44.63
Bra015579.1-P	Field mustard	nucleus	40.3	43.9
CDY10275	Canola	nucleus	40.52	43.72
Bra031574.1-P	Field mustard	nucleus	40.95	43.58
CDY06259	Canola	nucleus	40.73	43.35
AT1G07430.1	Thale cress	nucleus	41.16	43.21
OQU78453	Sorghum	nucleus	34.91	41.01
Bra030455.1-P	Field mustard	cytosol	14.01	40.88
KXG22422	Sorghum	cytosol, nucleus, plastid	29.09	35.53
KXG33023	Sorghum	nucleus	35.78	35.02
OQU87413	Sorghum	cytosol	28.88	34.99
CDY36606	Canola	nucleus	17.89	33.2
EES11811	Sorghum	plastid	34.91	33.13
KXG22681	Sorghum	cytosol	30.39	32.94
EES00964	Sorghum	peroxisome, plasma membrane, vacuole	30.82	29.67
OQU90183	Sorghum	mitochondrion	15.09	24.65
OQU86100	Sorghum	nucleus	15.09	17.54
PGSC0003DMT400049695	Potato	extracellular	2.16	9.09
KXG28797	Sorghum	golgi, plasma membrane, vacuole	18.53	8.06

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.1	UniProt:A0A1B6P951	GO:GO:0003674	GO:GO:0003824
GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872
InterPro:IPR001932	InterPro:IPR036457	EnsemblPlants:KXG22152	ProteinID:KXG22152	ProteinID:KXG22152.1	PFAM:PF00481
InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746
PANTHER:PTHR13832	PANTHER:PTHR13832:SF532	SMART:SM00332	EnsemblPlantsGene:SORBI_3009G161800	SUPFAM:SSF81606	UniParc:UPI00022072D0
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:51880411..51882291

Molecular Weight (calculated)

48818.7 Da

IEP (calculated)

8.144

GRAVY (calculated)

-0.240

Length

464 amino acids

Sequence
(BLAST)

001: MAEICCEETK STPPASASAI TALARGRPRV EMAVAEAACR SSSSSTPAAD EGAGGGGGAS ATRCGKRRRV ACAAPVRSCQ RSRTTSGFGS TWWWPRYGVT
101: SVCGLRREME DAVSIRPDFL RGAADPSSGK HHFYGVFDGH GCCHVARMCQ DRMHALVADE YKKAGSGNSA TAAAAEPAWE EVMKKVFARM DGEAATRAAS
201: RSSNGSIACR CELQKPTRCD HAGSTAVVAV VSPTSVVVAN AGDSRAVLSR AGVPVPLSVD HKPDRQDELE RIQEAGGRVI YWDGARVLGV LAMSRAIGER
301: RAAPRAFVRN PSELSVQTNI FGPPCFSLKL FGRAGDGYLK PFVTAEPEVA VTERTDDDEC LILASDGLWD VVTNEMACDV VRACFRSNGP PSPPAARPNG
401: VLPPPAAGAG REGDDGAASP VKGVDKADSD RACSEAALLL AKLALARRST DNVSVVVVDL RRRC

Best Arabidopsis Sequence Match ( AT1G07430.1 )
(BLAST)

001: MADICYEDET SACESRPLWS SRKWRIGVQR FRMSPSEMNP TASTTEEEDK SEGIYNKRNK QEEYDFMNCA SSSPSQSSPE EESVSLEDSD VSISDGNSSV
101: NDVAVIPSKK TVKETDLRPR YGVASVCGRR RDMEDAVALH PSFVRKQTEF SRTRWHYFGV YDGHGCSHVA ARCKERLHEL VQEEALSDKK EEWKKMMERS
201: FTRMDKEVVR WGETVMSANC RCELQTPDCD AVGSTAVVSV ITPEKIIVAN CGDSRAVLCR NGKAVPLSTD HKPDRPDELD RIQEAGGRVI YWDGARVLGV
301: LAMSRAIGDN YLKPYVTSEP EVTVTDRTEE DEFLILATDG LWDVVTNEAA CTMVRMCLNR KSGRGRRRGE TQTPGRRSEE EGKEEEEKVV GSRKNGKRGE
401: ITDKACTEAS VLLTKLALAK HSSDNVSVVV IDLRRRRKRH VA

Arabidopsis Description

AIP1Protein phosphatase 2C 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.