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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, cytosol

Predictor Summary:
  • nucleus 1
  • mitochondrion 3
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
EER91957
EER92493
EER94470
EER96576
EES01744
EES03354
EES06704
EES13374
KXG22152
KXG22403
KXG35986
OQU79501
OQU93471

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G30270.1 EER92493 AT1G07430.1 17898163
AT1G30270.1 EER96576 AT1G07430.1 17898163
AT1G30270.1 EES01744 AT1G07430.1 17898163
AT1G30270.1 KXG22152 AT1G07430.1 17898163
AT1G30270.1 KXG35986 AT1G07430.1 17898163
AT1G30270.1 EER91957 AT1G12110.1 19766570
AT1G30270.1 EES13374 AT1G12110.1 19766570
AT1G30270.1 OQU93471 AT1G12110.1 19766570
AT1G30270.1 EES06704 AT1G64480.1 16814720
AT1G30270.1 KXG22403 AT1G64480.1 16814720
AT1G30270.1 EES03354 AT2G26650.1 16814720
AT1G30270.1 EES03354 AT2G26650.1 17898163
AT1G30270.1 EER94470 AT5G47100.1 14730064
AT1G30270.1 EER94470 AT5G47100.1 16814720
AT1G30270.1 EER94470 AT5G47100.1 17898163
AT1G30270.1 EER94470 AT5G47100.1 21798944
AT1G30270.1 OQU79501 AT5G55990.1 16814720
AT1G30270.1 OQU79501 AT5G55990.1 17898163
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os07t0150700-01 Rice mitochondrion 93.97 90.0
TraesCS2D01G252600.1 Wheat cytosol 94.43 89.85
Zm00001d018799_P001 Maize mitochondrion 99.07 89.14
TraesCS2A01G251800.1 Wheat cytosol 94.66 88.5
TraesCS2B01G271700.1 Wheat cytosol 94.66 88.31
HORVU2Hr1G060350.5 Barley cytosol 94.43 88.29
VIT_10s0003g04020.t01 Wine grape cytosol 80.51 76.26
PGSC0003DMT400080484 Potato cytosol 79.81 75.6
Solyc02g021440.2.1 Tomato cytosol 80.05 75.49
GSMUA_Achr4P23000_001 Banana cytosol 78.19 74.89
GSMUA_Achr4P31540_001 Banana cytosol 75.87 73.98
CDY26276 Canola mitochondrion 78.19 72.79
Bra032374.1-P Field mustard plastid 78.19 72.16
CDY63182 Canola mitochondrion 78.19 72.16
KRH37794 Soybean cytosol 77.26 72.08
AT1G30270.1 Thale cress cytosol, plastid 79.35 70.95
Bra014875.1-P Field mustard plastid 78.65 70.77
CDX90240 Canola plastid 78.19 70.65
CDX98191 Canola plastid 78.89 70.39
CDX77603 Canola plastid 78.65 70.33
Bra010783.1-P Field mustard plastid 71.93 68.13
OQU82814 Sorghum cytosol 64.97 63.64
EES16537 Sorghum cytosol 58.7 62.78
EER92947 Sorghum cytosol, plastid 64.73 62.42
EER92350 Sorghum cytosol, mitochondrion 62.41 59.91
KXG37001 Sorghum cytosol, mitochondrion 59.63 57.37
KRH12829 Soybean cytosol 34.8 54.95
EER90021 Sorghum cytosol 56.15 53.9
KXG32670 Sorghum cytosol 54.76 51.98
CDY49976 Canola cytosol 41.76 46.15
EER97615 Sorghum cytosol 46.87 45.5
EES00612 Sorghum cytosol 47.1 43.84
OQU77359 Sorghum cytosol, mitochondrion 44.78 41.87
EES19859 Sorghum cytosol 34.11 29.17
EES01406 Sorghum cytosol 33.64 29.06
KXG39612 Sorghum cytosol 33.64 28.27
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:18.4.5.3Gene3D:3.30.200.20Gene3D:3.30.310.80UniProt:A0A1W0W220InterPro:Ca/CaM-dep_Ca-dep_prot_KinaseGO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0005829
GO:GO:0005886GO:GO:0006464GO:GO:0006468GO:GO:0006810GO:GO:0006950GO:GO:0007154
GO:GO:0007165GO:GO:0007584GO:GO:0008150GO:GO:0008152GO:GO:0009414GO:GO:0009536
GO:GO:0009605GO:GO:0009628GO:GO:0009987GO:GO:0009991GO:GO:0010107GO:GO:0010118
GO:GO:0016020GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538GO:GO:0035556
InterPro:IPR000719InterPro:IPR018451InterPro:Kinase-like_dom_sfInterPro:NAF/FISL_domainInterPro:NAF_domEnsemblPlants:OQU88438
ProteinID:OQU88438ProteinID:OQU88438.1PFAM:PF00069PFAM:PF03822PIRSF:PIRSF000654ScanProsite:PS00107
ScanProsite:PS00108PFscan:PS50011PFscan:PS50816PANTHER:PTHR43895PANTHER:PTHR43895:SF11InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BSSMART:SM00220EnsemblPlantsGene:SORBI_3002G034700SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI0009DC8DB3
Description
hypothetical protein
Coordinates
chr2:-:3172536..3176024
Molecular Weight (calculated)
48806.0 Da
IEP (calculated)
9.889
GRAVY (calculated)
-0.384
Length
431 amino acids
Sequence
(BLAST)
001: MSASVGRTRV GRYELGRTLG EGTFAKVKFA RNVETGENVA IKILDKEKVL KHKMIAQIKR EISTMKLIRH PNVIRMYEVM ASKTKIYIVM ELVTGGELFD
101: KIASRGRLKE DDARKYFQQL INAVDYCHSR GVYHRDLKPE NLLLDASGTL KVSDFGLSAL SQQVRVINNK GYDGAKADLW SCGVILFVLM AGYLPFEDSN
201: LMSLYKKIFK ADFSCPSWFS TSAKKLIKKI LDPNVNTRIT IAELINNEWF KKGYQPPRFE TADVNLDDVN SIFDESGEPA QLVVERREER PSVMNAFELI
301: STSQGLNLGT LFEKQTGPVK RETRFASRLP ANEILSKIEA AAGPMGFNVQ KRNYKLKLQG ENPGRKGQLA IATEVFEVTP SLYMVELRKS NGDTLEFHKF
401: YHNISNGLKD VMWKPESGIV EGDEVRQRRS P
Best Arabidopsis Sequence Match ( AT1G30270.1 )
(BLAST)
001: MASRTTPSRS TPSRSTPSGS SSGGRTRVGK YELGRTLGEG TFAKVKFARN VENGDNVAIK VIDKEKVLKN KMIAQIKREI STMKLIKHPN VIRMFEVMAS
101: KTKIYFVLEF VTGGELFDKI SSNGRLKEDE ARKYFQQLIN AVDYCHSRGV YHRDLKPENL LLDANGALKV SDFGLSALPQ QVREDGLLHT TCGTPNYVAP
201: EVINNKGYDG AKADLWSCGV ILFVLMAGYL PFEDSNLTSL YKKIFKAEFT CPPWFSASAK KLIKRILDPN PATRITFAEV IENEWFKKGY KAPKFENADV
301: SLDDVDAIFD DSGESKNLVV ERREEGLKTP VTMNAFELIS TSQGLNLGSL FEKQMGLVKR KTRFTSKSSA NEIVTKIEAA AAPMGFDVKT NNYKMKLTGE
401: KSGRKGQLAV ATEVFQVAPS LYMVEMRKSG GDTLEFHKFY KNLTTGLKDI VWKTIDEEKE EGTDGGGTNG AMANRTIAKQ ST
Arabidopsis Description
CIPK23CBL-interacting serine/threonine-protein kinase 23 [Source:UniProtKB/Swiss-Prot;Acc:Q93VD3]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.