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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • nucleus 1
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:cytosol
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU1Hr1G053990.4
HORVU1Hr1G054020.3
HORVU1Hr1G055300.1
HORVU1Hr1G064470.1
HORVU1Hr1G080780.4
HORVU1Hr1G080790.11
HORVU1Hr1G080820.4
HORVU3Hr1G058300.1
HORVU3Hr1G085930.3
HORVU4Hr1G011670.1
HORVU4Hr1G060370.1
HORVU4Hr1G088020.4
HORVU4Hr1G090270.10
HORVU5Hr1G016320.1
HORVU7Hr1G071600.2

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G30270.1 HORVU3Hr1G085930.3 AT1G07430.1 17898163
AT1G30270.1 HORVU4Hr1G060370.1 AT1G07430.1 17898163
AT1G30270.1 HORVU1Hr1G053990.4 AT1G12110.1 19766570
AT1G30270.1 HORVU1Hr1G054020.3 AT1G12110.1 19766570
AT1G30270.1 HORVU4Hr1G088020.4 AT1G12110.1 19766570
AT1G30270.1 HORVU7Hr1G071600.2 AT1G12110.1 19766570
AT1G30270.1 HORVU1Hr1G064470.1 AT1G64480.1 16814720
AT1G30270.1 HORVU1Hr1G080780.4 AT1G64480.1 16814720
AT1G30270.1 HORVU1Hr1G080790.11 AT1G64480.1 16814720
AT1G30270.1 HORVU1Hr1G080820.4 AT1G64480.1 16814720
AT1G30270.1 HORVU3Hr1G058300.1 AT2G26650.1 16814720
AT1G30270.1 HORVU3Hr1G058300.1 AT2G26650.1 17898163
AT1G30270.1 HORVU1Hr1G055300.1 AT5G47100.1 14730064
AT1G30270.1 HORVU4Hr1G090270.10 AT5G47100.1 14730064
AT1G30270.1 HORVU1Hr1G055300.1 AT5G47100.1 16814720
AT1G30270.1 HORVU4Hr1G090270.10 AT5G47100.1 16814720
AT1G30270.1 HORVU1Hr1G055300.1 AT5G47100.1 17898163
AT1G30270.1 HORVU4Hr1G090270.10 AT5G47100.1 17898163
AT1G30270.1 HORVU1Hr1G055300.1 AT5G47100.1 21798944
AT1G30270.1 HORVU4Hr1G090270.10 AT5G47100.1 21798944
AT1G30270.1 HORVU4Hr1G011670.1 AT5G55990.1 16814720
AT1G30270.1 HORVU5Hr1G016320.1 AT5G55990.1 16814720
AT1G30270.1 HORVU4Hr1G011670.1 AT5G55990.1 17898163
AT1G30270.1 HORVU5Hr1G016320.1 AT5G55990.1 17898163
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2A01G251800.1 Wheat cytosol 99.78 99.78
TraesCS2B01G271700.1 Wheat cytosol 99.78 99.57
TraesCS2D01G252600.1 Wheat cytosol 97.61 99.34
OQU88438 Sorghum cytosol, mitochondrion 88.29 94.43
Os07t0150700-01 Rice mitochondrion 91.11 93.33
Zm00001d018799_P001 Maize mitochondrion 92.19 88.73
VIT_10s0003g04020.t01 Wine grape cytosol 78.52 79.56
Solyc02g021440.2.1 Tomato cytosol 78.09 78.77
PGSC0003DMT400080484 Potato cytosol 77.66 78.68
GSMUA_Achr4P31540_001 Banana cytosol 74.84 78.05
GSMUA_Achr4P23000_001 Banana cytosol 75.05 76.89
KRH37794 Soybean cytosol 76.57 76.41
CDY26276 Canola mitochondrion 75.49 75.16
CDY63182 Canola mitochondrion 75.7 74.73
Bra032374.1-P Field mustard plastid 75.49 74.52
AT1G30270.1 Thale cress cytosol, plastid 76.36 73.03
CDX90240 Canola plastid 75.27 72.75
Bra014875.1-P Field mustard plastid 75.49 72.65
CDX77603 Canola plastid 75.7 72.41
CDX98191 Canola plastid 75.7 72.26
HORVU5Hr1G060640.2 Barley cytosol, mitochondrion, plastid 32.1 71.15
Bra010783.1-P Field mustard plastid 69.41 70.33
HORVU4Hr1G026300.12 Barley cytosol 62.91 65.91
HORVU4Hr1G083080.1 Barley cytosol 61.61 63.82
HORVU4Hr1G052200.2 Barley mitochondrion 61.39 63.03
HORVU2Hr1G016750.17 Barley cytosol, mitochondrion 60.3 62.05
KRH12829 Soybean cytosol 32.75 55.31
HORVU7Hr1G090260.14 Barley cytosol 53.8 49.11
CDY49976 Canola cytosol 41.43 48.97
HORVU2Hr1G027080.5 Barley cytosol 46.2 47.23
HORVU6Hr1G030150.2 Barley cytosol 41.43 43.21
HORVU1Hr1G017380.4 Barley cytosol 44.9 41.82
HORVU1Hr1G017240.4 Barley cytosol 44.47 41.67
HORVU1Hr1G081310.4 Barley cytosol 34.71 30.77
HORVU4Hr1G056610.3 Barley cytosol 33.62 30.16
HORVU3Hr1G069190.1 Barley cytosol, plastid 34.49 27.85
HORVU3Hr1G107970.1 Barley cytosol 32.54 27.37
HORVU3Hr1G107990.1 Barley cytosol 32.75 27.36
HORVU3Hr1G108000.3 Barley cytosol 15.4 20.52
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:18.4.5.3Gene3D:3.30.200.20Gene3D:3.30.310.80InterPro:Ca/CaM-dep_Ca-dep_prot_KinaseGO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0005829GO:GO:0005886
GO:GO:0006464GO:GO:0006468GO:GO:0006810GO:GO:0006950GO:GO:0007154GO:GO:0007165
GO:GO:0007584GO:GO:0008150GO:GO:0008152GO:GO:0009414GO:GO:0009536GO:GO:0009605
GO:GO:0009628GO:GO:0009987GO:GO:0009991GO:GO:0010107GO:GO:0010118GO:GO:0016020
GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:HORVU2Hr1G060350EnsemblPlants:HORVU2Hr1G060350.5
InterPro:IPR000719InterPro:IPR018451InterPro:Kinase-like_dom_sfUniProt:M0XMJ9InterPro:NAF/FISL_domainInterPro:NAF_dom
PFAM:PF00069PFAM:PF03822PIRSF:PIRSF000654ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011
PFscan:PS50816PANTHER:PTHR43895PANTHER:PTHR43895:SF11InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220
SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI0002965C48SEG:seg::
Description
Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:M0XMJ9]
Coordinates
chrchr2H:+:403064608..403068631
Molecular Weight (calculated)
51773.3 Da
IEP (calculated)
9.557
GRAVY (calculated)
-0.430
Length
461 amino acids
Sequence
(BLAST)
001: MVDSSAGGKM SAHGGGGGRT RVGRYELGRT LGEGTFAKVK FARNVETSEN VAIKILDKDK VLKHKMIAQI KREISTMKLI RHPNVIRMYE VMASRTKIYI
101: VMELVTGGEL FDKIASRGRL KEDDARKYFQ QLINAVDYCH SRGVYHRDLK PENLLLDANG TLKVSDFGLS ALSQQVREDG LLHTTCGTPN YVAPEVINNK
201: GYDGAKADLW SCGVILFVLM AGYLPFEDSN LMALYKKIYK ADFSCPSWFS TSAKKLIKKI LDPNPNTRIT IAEVINNEWF KKGYQPPRFE TAEVNLDDIN
301: SIFNESGDPA QLVVERREER PAVMNAFELI STSQGLNLGT LFEKQTDSVK RETRFASRLP ANEILSKIEA AAGPMGFNVQ KRNYKLKLQG ENPGRKGQLA
401: IATEVFEVTP SLYMVELRKS NGDTLEFHKF YHSISNGLKD VMWKPEGSIA EGDETRHRRS P
Best Arabidopsis Sequence Match ( AT1G30270.1 )
(BLAST)
001: MASRTTPSRS TPSRSTPSGS SSGGRTRVGK YELGRTLGEG TFAKVKFARN VENGDNVAIK VIDKEKVLKN KMIAQIKREI STMKLIKHPN VIRMFEVMAS
101: KTKIYFVLEF VTGGELFDKI SSNGRLKEDE ARKYFQQLIN AVDYCHSRGV YHRDLKPENL LLDANGALKV SDFGLSALPQ QVREDGLLHT TCGTPNYVAP
201: EVINNKGYDG AKADLWSCGV ILFVLMAGYL PFEDSNLTSL YKKIFKAEFT CPPWFSASAK KLIKRILDPN PATRITFAEV IENEWFKKGY KAPKFENADV
301: SLDDVDAIFD DSGESKNLVV ERREEGLKTP VTMNAFELIS TSQGLNLGSL FEKQMGLVKR KTRFTSKSSA NEIVTKIEAA AAPMGFDVKT NNYKMKLTGE
401: KSGRKGQLAV ATEVFQVAPS LYMVEMRKSG GDTLEFHKFY KNLTTGLKDI VWKTIDEEKE EGTDGGGTNG AMANRTIAKQ ST
Arabidopsis Description
CIPK23CBL-interacting serine/threonine-protein kinase 23 [Source:UniProtKB/Swiss-Prot;Acc:Q93VD3]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.