Factsheet for HORVU1Hr1G080790.11

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G060350.5

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G64480.1	HORVU2Hr1G060350.5	AT1G30270.1	16814720

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G370800.1	Wheat	cytosol	85.13	74.77
Os05t0534400-01	Rice	plasma membrane	78.97	73.33
KXG22403	Sorghum	cytosol	78.97	72.64
GSMUA_Achr1P13780_001	Banana	cytosol	69.23	69.23
TraesCS1B01G370600.1	Wheat	nucleus	50.77	67.35
GSMUA_Achr1P13790_001	Banana	cytosol	71.79	64.81
HORVU1Hr1G064470.1	Barley	cytosol	69.74	63.85
PGSC0003DMT400046089	Potato	cytosol	59.49	59.49
VIT_02s0025g01640.t01	Wine grape	cytosol	65.13	57.99
HORVU1Hr1G080820.4	Barley	cytosol, nucleus, plastid	73.85	56.92
AT1G64480.1	Thale cress	cytosol, mitochondrion	62.05	56.54
CDY64882	Canola	mitochondrion	61.54	56.07
CDY46533	Canola	mitochondrion	61.54	56.07
Bra027703.1-P	Field mustard	mitochondrion	61.54	56.07
Solyc12g055920.1.1	Tomato	cytosol, mitochondrion	62.05	53.54
Solyc08g036590.1.1	Tomato	endoplasmic reticulum, extracellular	57.95	49.34
Zm00001d038730_P001	Maize	cytosol	78.46	49.2
HORVU1Hr1G055300.1	Barley	cytosol	53.85	48.84
HORVU4Hr1G090270.10	Barley	cytosol	51.28	46.08
HORVU5Hr1G040030.6	Barley	cytosol	52.82	45.37
HORVU5Hr1G016320.1	Barley	cytosol	52.31	45.33
HORVU4Hr1G011670.1	Barley	vacuole	52.31	45.33
Solyc08g054570.1.1	Tomato	cytosol	41.54	43.55
HORVU1Hr1G080780.4	Barley	golgi, nucleus	83.59	34.9

Protein Annotations

EnsemblPlants:HORVU1Hr1G080790.11	EnsemblPlantsGene:HORVU1Hr1G080790	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR23056	PANTHER:PTHR23056:SF45
PFAM:PF13499	PFAM:PF13833	PFscan:PS50222	ScanProsite:PS00018	SEG:seg	SMART:SM00054
SUPFAM:SSF47473	UniParc:UPI000B47E3F2	UniProt:A0A287GG77	MapMan:35.1	:	:

Description

No Description!

Coordinates

chrchr1H:+:526251830..526255050

Molecular Weight (calculated)

22531.7 Da

IEP (calculated)

6.558

GRAVY (calculated)

-0.512

Length

195 amino acids

Sequence
(BLAST)

001: CRRGRRRRRS VSSAQGYEEP TVLAAETSFT VKEVEALYEL YKKLSFSIFK DGLIHKEEFR LALFRNSKRE NLFADRVFDL FDLKRNGVIE FGEFVRSLSI
101: FHPKAPEADK TAFAFKLYDL RGTGCIEKEE LREMVVALLD ESDLRLSDSA VDEIVDNTFS QADSNGDGRI DPKEWKEFVK KNPASLRNMS LPYLQ

Best Arabidopsis Sequence Match ( AT1G64480.4 )
(BLAST)

001: MLAFVKCFSL KRAKHPRGYE DPHVLASETP FTVNEIEALH DLFKKLSTSI INDGLIHKEE FLLALFRNGS MQNLFADRVF YMFDRKRNGV IEFGEFVRSL
101: SIFHPYTPEH EKSAFMFKLF DLHGTGFIEP HELKKMVGAL LGETDLELSE ESIEAIVEQT MLEVDTNKDG KIDEEEWKEL VAKNPSILKN MTLPYLK

Arabidopsis Description

CBL8Calcineurin B-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUQ7]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.