Factsheet for HORVU1Hr1G080820.4

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

cytosol 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G060350.5

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G64480.1	HORVU2Hr1G060350.5	AT1G30270.1	16814720

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G370500.1	Wheat	cytosol	73.12	83.33
TraesCS1A01G352200.1	Wheat	cytosol	72.33	82.43
TraesCS1D01G358200.2	Wheat	cytosol, plastid	73.12	81.5
HORVU1Hr1G080790.11	Barley	cytosol	56.92	73.85
Os05t0534400-01	Rice	plasma membrane	60.08	72.38
KXG22403	Sorghum	cytosol	58.5	69.81
GSMUA_Achr1P13790_001	Banana	cytosol	51.78	60.65
HORVU1Hr1G064470.1	Barley	cytosol	50.99	60.56
GSMUA_Achr1P13780_001	Banana	cytosol	46.25	60.0
VIT_02s0025g01640.t01	Wine grape	cytosol	48.62	56.16
AT1G64480.1	Thale cress	cytosol, mitochondrion	45.85	54.21
TraesCS4D01G162400.1	Wheat	cytosol	45.45	53.99
CDY64882	Canola	mitochondrion	45.45	53.74
CDY46533	Canola	mitochondrion	45.45	53.74
Bra027703.1-P	Field mustard	mitochondrion	45.45	53.74
PGSC0003DMT400046089	Potato	cytosol	39.92	51.79
Solyc12g055920.1.1	Tomato	cytosol, mitochondrion	45.45	50.88
HORVU1Hr1G055300.1	Barley	cytosol	42.29	49.77
Solyc08g036590.1.1	Tomato	endoplasmic reticulum, extracellular	43.48	48.03
HORVU4Hr1G090270.10	Barley	cytosol	40.71	47.47
Zm00001d038730_P001	Maize	cytosol	57.31	46.62
HORVU5Hr1G016320.1	Barley	cytosol	40.32	45.33
HORVU4Hr1G011670.1	Barley	vacuole	40.32	45.33
Solyc08g054570.1.1	Tomato	cytosol	30.43	41.4
HORVU5Hr1G040030.6	Barley	cytosol	36.76	40.97
HORVU1Hr1G080780.4	Barley	golgi, nucleus	75.1	40.69

Protein Annotations

EnsemblPlants:HORVU1Hr1G080820.4	EnsemblPlantsGene:HORVU1Hr1G080820	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR23056	PANTHER:PTHR23056:SF45
PFAM:PF13202	PFAM:PF13833	PFscan:PS50222	ScanProsite:PS00018	SEG:seg	SMART:SM00054
SUPFAM:SSF47473	UniParc:UPI000B465A43	UniProt:A0A287GG73	MapMan:35.1	:	:

Description

No Description!

Coordinates

chrchr1H:-:526318715..526321047

Molecular Weight (calculated)

28724.5 Da

IEP (calculated)

6.690

GRAVY (calculated)

-0.642

Length

253 amino acids

Sequence
(BLAST)

001: LKEHEDSRGD GRRPRGAGWR LRAWRPSREH SAGEVYLSSC RASRGTVLVQ DRSPMGCAWS SSSPSRSPSN REQRAQGYEE PAVLAAETSF TVNEVEALYE
101: LYKKLSFSIF KDGLIHKEEF RLALFRNSKG ANLFADRVFD LFDLKRNGVI EFGEFVRSLS IFHPKAPESD KTVAVAFKLY DLRGTGYIEK EETFSQADSD
201: GDGRINPKEW EEFVNKNPAS LRNMSLPYLQ DITTTFPSFV MHSEVEDYSG ISK

Best Arabidopsis Sequence Match ( AT1G64480.1 )
(BLAST)

001: MLAFVKCFSL KRAKHPRGYE DPHVLASETP FTVNEIEALH DLFKKLSTSI INDGLIHKEE FLLALFRNGS MQNLFADRVF YMFDRKRNGV IEFGEFVRSL
101: SIFHPYTPEH EKSAFMFKLF DLHGTGFIEP HELKKMVGAL LGETDLELSE ESIEAIVEQT MLEVDTNKDG KIDEEEWKEL VAKNPSILKN MTLPYLKEVT
201: LAFPSFVLDS EVED

Arabidopsis Description

CBL8Calcineurin B-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUQ7]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.