Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| PGSC0003DMT400080484 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G64480.1 | PGSC0003DMT400080484 | AT1G30270.1 | 16814720 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g036590.1.1 | Tomato | endoplasmic reticulum, extracellular | 92.82 | 79.04 |
| Solyc08g054570.1.1 | Tomato | cytosol | 73.85 | 77.42 |
| Zm00001d053293_P001 | Maize | cytosol | 60.51 | 60.82 |
| GSMUA_Achr1P13780_001 | Banana | cytosol | 59.49 | 59.49 |
| HORVU1Hr1G080790.11 | Barley | cytosol | 59.49 | 59.49 |
| VIT_02s0025g01640.t01 | Wine grape | cytosol | 64.62 | 57.53 |
| TraesCS1D01G261200.1 | Wheat | cytosol | 61.54 | 56.34 |
| HORVU1Hr1G064470.1 | Barley | cytosol | 61.54 | 56.34 |
| PGSC0003DMT400050430 | Potato | cytosol | 61.54 | 56.07 |
| GSMUA_Achr1P13790_001 | Banana | cytosol | 61.54 | 55.56 |
| Bra027703.1-P | Field mustard | mitochondrion | 60.0 | 54.67 |
| PGSC0003DMT400023568 | Potato | cytosol | 60.0 | 54.67 |
| CDY46533 | Canola | mitochondrion | 60.0 | 54.67 |
| CDY64882 | Canola | mitochondrion | 60.0 | 54.67 |
| GSMUA_Achr3P03340_001 | Banana | cytosol | 58.97 | 54.25 |
| TraesCS1D01G346500.1 | Wheat | cytosol | 59.49 | 53.95 |
| TraesCS1D01G346400.1 | Wheat | cytosol | 59.49 | 53.95 |
| AT1G64480.1 | Thale cress | cytosol, mitochondrion | 58.97 | 53.74 |
| TraesCS1D01G358400.1 | Wheat | mitochondrion | 60.0 | 53.67 |
| TraesCS1B01G272000.1 | Wheat | cytosol | 61.54 | 53.57 |
| TraesCS1A01G261200.1 | Wheat | cytosol | 61.54 | 53.57 |
| EES06704 | Sorghum | cytosol | 58.46 | 53.52 |
| Os02t0291000-00 | Rice | cytosol | 58.46 | 53.52 |
| Os05t0534400-01 | Rice | plasma membrane | 57.44 | 53.33 |
| KXG22403 | Sorghum | cytosol | 57.44 | 52.83 |
| TraesCS1B01G370900.1 | Wheat | mitochondrion | 58.97 | 52.75 |
| TraesCS1A01G352200.1 | Wheat | cytosol | 60.0 | 52.7 |
| Os02t0291400-00 | Rice | plasma membrane | 57.44 | 52.58 |
| PGSC0003DMT400014960 | Potato | cytosol | 31.79 | 52.1 |
| TraesCS1B01G370500.1 | Wheat | cytosol | 58.46 | 51.35 |
| TraesCS1D01G358200.2 | Wheat | cytosol, plastid | 59.49 | 51.1 |
| TraesCS1B01G370800.1 | Wheat | cytosol | 57.95 | 50.9 |
| TraesCS1B01G357200.1 | Wheat | cytosol | 54.36 | 49.3 |
| PGSC0003DMT400057342 | Potato | cytosol, extracellular | 54.36 | 48.4 |
| PGSC0003DMT400011576 | Potato | cytosol | 52.82 | 48.36 |
| PGSC0003DMT400068352 | Potato | cytosol | 52.31 | 47.44 |
| PGSC0003DMT400037245 | Potato | cytosol | 52.82 | 46.4 |
| PGSC0003DMT400076653 | Potato | cytosol | 52.82 | 45.98 |
| PGSC0003DMT400014962 | Potato | cytosol | 21.54 | 42.86 |
| PGSC0003DMT400088667 | Potato | cytosol | 48.72 | 42.41 |
| TraesCS1B01G370600.1 | Wheat | nucleus | 31.28 | 41.5 |
| TraesCS4D01G162400.1 | Wheat | cytosol | 44.1 | 40.38 |
| HORVU1Hr1G080820.4 | Barley | cytosol, nucleus, plastid | 51.79 | 39.92 |
| PGSC0003DMT400076980 | Potato | mitochondrion | 55.38 | 37.24 |
| PGSC0003DMT400052805 | Potato | cytosol | 49.23 | 36.78 |
| Zm00001d038730_P001 | Maize | cytosol | 57.44 | 36.01 |
| HORVU1Hr1G080780.4 | Barley | golgi, nucleus | 58.46 | 24.41 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400046089 | EnsemblPlantsGene:PGSC0003DMG400017886 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23056 | PANTHER:PTHR23056:SF59 |
| PFAM:PF13202 | PFAM:PF13499 | PFscan:PS50222 | PGSC:PGSC0003DMG400017886 | PRINTS:PR00450 | ScanProsite:PS00018 |
| SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI000295DF53 | UniProt:M1BIM8 | MapMan:35.1 | : |
Description
Calcineurin B 04 [Source:PGSC_GENE;Acc:PGSC0003DMG400017886]
Coordinates
chr8:+:12691786..12693575
Molecular Weight (calculated)
22651.1 Da
IEP (calculated)
5.159
GRAVY (calculated)
-0.290
Length
195 amino acids
Sequence
(BLAST)
(BLAST)
001: MHSLKDCFCL KKTRHLLETH DTLASETCFS ENDVEALYIL YKRLSSSIID DGLIHKEEFL QALFSCSHRQ NLFADRLFDV FDLKRNGIIE FGEFVRSLSI
101: FHPKAPQQDK ITFAFKVYDL KNTGYIERDE LKDMVLAVLE ESKLTLANDA IESIVHKTIE EADLNGDGRI DPKEWKELVT RYPSLIKNMT LPYLE
101: FHPKAPQQDK ITFAFKVYDL KNTGYIERDE LKDMVLAVLE ESKLTLANDA IESIVHKTIE EADLNGDGRI DPKEWKELVT RYPSLIKNMT LPYLE
001: MLAFVKCFSL KRAKHPRGYE DPHVLASETP FTVNEIEALH DLFKKLSTSI INDGLIHKEE FLLALFRNGS MQNLFADRVF YMFDRKRNGV IEFGEFVRSL
101: SIFHPYTPEH EKSAFMFKLF DLHGTGFIEP HELKKMVGAL LGETDLELSE ESIEAIVEQT MLEVDTNKDG KIDEEEWKEL VAKNPSILKN MTLPYLKEVT
201: LAFPSFVLDS EVED
101: SIFHPYTPEH EKSAFMFKLF DLHGTGFIEP HELKKMVGAL LGETDLELSE ESIEAIVEQT MLEVDTNKDG KIDEEEWKEL VAKNPSILKN MTLPYLKEVT
201: LAFPSFVLDS EVED
Arabidopsis Description
CBL8Calcineurin B-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUQ7]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.