Factsheet for HORVU1Hr1G080780.4

Subcellular Localization

min:

: max

Winner_takes_all: golgi, nucleus

Predictor Summary:

golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, nucleus
Any Predictor:	golgi
MultiLoc:	golgi
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G060350.5

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G64480.1	HORVU2Hr1G060350.5	AT1G30270.1	16814720

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G370900.1	Wheat	mitochondrion	45.18	96.79
TraesCS1D01G358400.1	Wheat	mitochondrion	44.33	94.95
HORVU1Hr1G080790.11	Barley	cytosol	34.9	83.59
Os05t0534400-01	Rice	plasma membrane	37.47	83.33
KXG22403	Sorghum	cytosol	37.26	82.08
HORVU1Hr1G080820.4	Barley	cytosol, nucleus, plastid	40.69	75.1
GSMUA_Achr1P13790_001	Banana	cytosol	33.19	71.76
HORVU1Hr1G064470.1	Barley	cytosol	32.12	70.42
GSMUA_Achr1P13780_001	Banana	cytosol	29.34	70.26
VIT_02s0025g01640.t01	Wine grape	cytosol	30.41	64.84
Bra027703.1-P	Field mustard	mitochondrion	28.05	61.22
AT1G64480.1	Thale cress	cytosol, mitochondrion	28.05	61.22
CDY64882	Canola	mitochondrion	28.05	61.22
CDY46533	Canola	mitochondrion	28.05	61.22
PGSC0003DMT400046089	Potato	cytosol	24.41	58.46
Solyc12g055920.1.1	Tomato	cytosol, mitochondrion	28.27	58.41
HORVU1Hr1G055300.1	Barley	cytosol	26.55	57.67
Zm00001d038730_P001	Maize	cytosol	36.83	55.31
HORVU4Hr1G090270.10	Barley	cytosol	24.84	53.46
Solyc08g036590.1.1	Tomato	endoplasmic reticulum, extracellular	25.91	52.84
HORVU5Hr1G016320.1	Barley	cytosol	25.05	52.0
HORVU4Hr1G011670.1	Barley	vacuole	24.84	51.56
HORVU5Hr1G040030.6	Barley	cytosol	23.55	48.46
Solyc08g054570.1.1	Tomato	cytosol	18.84	47.31

Protein Annotations

EnsemblPlants:HORVU1Hr1G080780.4	EnsemblPlantsGene:HORVU1Hr1G080780	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	InterPro:EF-hand-dom_pair
InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR23056	PANTHER:PTHR23056:SF45	PFAM:PF13202
PFAM:PF13499	PFscan:PS50222	ScanProsite:PS00018	SEG:seg	SMART:SM00054	SUPFAM:SSF47473
UniParc:UPI000B46E051	UniProt:A0A287GG50	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:526214360..526217127

Molecular Weight (calculated)

52451.1 Da

IEP (calculated)

9.397

GRAVY (calculated)

-0.449

Length

467 amino acids

Sequence
(BLAST)

001: PRRRPATRDV AERDALASRL PVNETNQPTA PNPFSHHPFS FIYHNCSSLC LSVSLSLCGY RFGAPVAVRK PRSAPAPIAR RELNGKKPFD LPPNTILLRP
101: DRAESSRGGT QTSRRKERTK GRAVSPTTTD GQTEQPAQRS SYSPFLAGSG QSTTADGGVW YSLLVRLRLS VNACRVRSLF SRRRGVLDRL SFRRSRTSRQ
201: RMGCVSSSPG RSRRAPGYED PAVLASQTSF TVNEVEALYE LYKKLSYSIF KDGLIHKEEF QLALFRTSKG PSLFADRVFD LFDLKRNGVI EFGEFVRSLS
301: IFHPKAPESD KAACMPPCLS YNRLFPVHSS SLLSKNHHLW FVTMLNSIYS CCPYSSPSHF VVAFKLYDLR GTGYIEKEEL RELVVALLDE SDLCLSDSAV
401: EEIVDNTFSQ ADSNGDDRID PKEWEEFVKK NPASLRNMSL PYLQDITTAF PSFVMHSEVD DYSGISK

Best Arabidopsis Sequence Match ( AT1G64480.1 )
(BLAST)

001: MLAFVKCFSL KRAKHPRGYE DPHVLASETP FTVNEIEALH DLFKKLSTSI INDGLIHKEE FLLALFRNGS MQNLFADRVF YMFDRKRNGV IEFGEFVRSL
101: SIFHPYTPEH EKSAFMFKLF DLHGTGFIEP HELKKMVGAL LGETDLELSE ESIEAIVEQT MLEVDTNKDG KIDEEEWKEL VAKNPSILKN MTLPYLKEVT
201: LAFPSFVLDS EVED

Arabidopsis Description

CBL8Calcineurin B-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUQ7]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.