Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS2A01G251800.1 | |
| TraesCS2B01G271700.1 | |
| TraesCS2D01G252600.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G64480.1 | TraesCS2A01G251800.1 | AT1G30270.1 | 16814720 |
| AT1G64480.1 | TraesCS2B01G271700.1 | AT1G30270.1 | 16814720 |
| AT1G64480.1 | TraesCS2D01G252600.1 | AT1G30270.1 | 16814720 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G358400.1 | Wheat | mitochondrion | 96.33 | 96.33 |
| TraesCS1B01G370500.1 | Wheat | cytosol | 89.91 | 88.29 |
| Os05t0534400-01 | Rice | plasma membrane | 82.11 | 85.24 |
| TraesCS1B01G370800.1 | Wheat | cytosol | 84.86 | 83.33 |
| KXG22403 | Sorghum | cytosol | 80.73 | 83.02 |
| TraesCS1B01G370600.1 | Wheat | nucleus | 55.5 | 82.31 |
| GSMUA_Achr1P13790_001 | Banana | cytosol | 71.1 | 71.76 |
| GSMUA_Achr1P13780_001 | Banana | cytosol | 62.84 | 70.26 |
| TraesCS1B01G272000.1 | Wheat | cytosol | 69.72 | 67.86 |
| VIT_02s0025g01640.t01 | Wine grape | cytosol | 65.14 | 64.84 |
| TraesCS1B01G357200.1 | Wheat | cytosol | 62.39 | 63.26 |
| Bra027703.1-P | Field mustard | mitochondrion | 59.17 | 60.28 |
| CDY64882 | Canola | mitochondrion | 59.17 | 60.28 |
| CDY46533 | Canola | mitochondrion | 59.17 | 60.28 |
| AT1G64480.1 | Thale cress | cytosol, mitochondrion | 59.17 | 60.28 |
| PGSC0003DMT400046089 | Potato | cytosol | 52.75 | 58.97 |
| Solyc12g055920.1.1 | Tomato | cytosol, mitochondrion | 60.55 | 58.41 |
| TraesCS1B01G229300.1 | Wheat | cytosol | 56.42 | 57.21 |
| Zm00001d038730_P001 | Maize | cytosol | 79.82 | 55.95 |
| TraesCS4B01G379200.1 | Wheat | cytosol | 49.54 | 53.2 |
| Solyc08g036590.1.1 | Tomato | endoplasmic reticulum, extracellular | 55.05 | 52.4 |
| TraesCS5B01G124300.1 | Wheat | cytosol | 54.13 | 52.21 |
| TraesCS5B01G071500.1 | Wheat | cytosol | 53.21 | 51.56 |
| Solyc08g054570.1.1 | Tomato | cytosol | 39.91 | 46.77 |
| HORVU1Hr1G080780.4 | Barley | golgi, nucleus | 96.79 | 45.18 |
| TraesCS4B01G069900.1 | Wheat | cytosol | 49.54 | 41.54 |
| TraesCS3B01G235500.1 | Wheat | cytosol | 54.59 | 41.32 |
| TraesCS3B01G064500.2 | Wheat | cytosol, golgi, mitochondrion | 54.13 | 39.86 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G370900.1 | EnsemblPlantsGene:TraesCS1B01G370900 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23056 | PANTHER:PTHR23056:SF45 |
| PFAM:PF13202 | PFAM:PF13499 | PFscan:PS50222 | PRINTS:PR00450 | ScanProsite:PS00018 | SEG:seg |
| SMART:SM00054 | SUPFAM:SSF47473 | TIGR:cd00051 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr1B:+:600603117..600604790
Molecular Weight (calculated)
24732.0 Da
IEP (calculated)
4.529
GRAVY (calculated)
-0.378
Length
218 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCVSSSPRR SRRAPGYEEP AVLASQTSFT VNEVEALYEL YKKLSYSIFK DGLIHKEEFQ LALFRTSKGP SLFADRVFDL FDLKRNGVIE FGEFVRSLSI
101: FHPKAPESDK TAFAFKLYDL RGTGYIEKEE LREMVVALLD ESDLCISDSA VEEIVDNTFS QADSNGDDRI DPKEWEEFVK KNPASLRNMS LPYLQDITTA
201: FPSFVMHSEA DDYSGISK
101: FHPKAPESDK TAFAFKLYDL RGTGYIEKEE LREMVVALLD ESDLCISDSA VEEIVDNTFS QADSNGDDRI DPKEWEEFVK KNPASLRNMS LPYLQDITTA
201: FPSFVMHSEA DDYSGISK
001: MLAFVKCFSL KRAKHPRGYE DPHVLASETP FTVNEIEALH DLFKKLSTSI INDGLIHKEE FLLALFRNGS MQNLFADRVF YMFDRKRNGV IEFGEFVRSL
101: SIFHPYTPEH EKSAFMFKLF DLHGTGFIEP HELKKMVGAL LGETDLELSE ESIEAIVEQT MLEVDTNKDG KIDEEEWKEL VAKNPSILKN MTLPYLKEVT
201: LAFPSFVLDS EVED
101: SIFHPYTPEH EKSAFMFKLF DLHGTGFIEP HELKKMVGAL LGETDLELSE ESIEAIVEQT MLEVDTNKDG KIDEEEWKEL VAKNPSILKN MTLPYLKEVT
201: LAFPSFVLDS EVED
Arabidopsis Description
CBL8Calcineurin B-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUQ7]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.