Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS2A01G251800.1 | |
| TraesCS2B01G271700.1 | |
| TraesCS2D01G252600.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G64480.1 | TraesCS2A01G251800.1 | AT1G30270.1 | 16814720 |
| AT1G64480.1 | TraesCS2B01G271700.1 | AT1G30270.1 | 16814720 |
| AT1G64480.1 | TraesCS2D01G252600.1 | AT1G30270.1 | 16814720 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G261200.1 | Wheat | cytosol | 94.64 | 99.53 |
| TraesCS1A01G261200.1 | Wheat | cytosol | 99.11 | 99.11 |
| HORVU1Hr1G064470.1 | Barley | cytosol | 93.3 | 98.12 |
| Os02t0291000-00 | Rice | cytosol | 83.93 | 88.26 |
| EES06704 | Sorghum | cytosol | 82.14 | 86.39 |
| TraesCS1B01G357200.1 | Wheat | cytosol | 82.14 | 85.58 |
| Os02t0291400-00 | Rice | plasma membrane | 79.46 | 83.57 |
| Zm00001d053293_P001 | Maize | cytosol | 72.32 | 83.51 |
| TraesCS1B01G370900.1 | Wheat | mitochondrion | 67.86 | 69.72 |
| GSMUA_Achr3P03340_001 | Banana | cytosol | 64.73 | 68.4 |
| TraesCS1B01G370500.1 | Wheat | cytosol | 64.73 | 65.32 |
| TraesCS1B01G370800.1 | Wheat | cytosol | 64.29 | 64.86 |
| TraesCS1B01G370600.1 | Wheat | nucleus | 40.62 | 61.9 |
| VIT_02s0025g01640.t01 | Wine grape | cytosol | 60.27 | 61.64 |
| PGSC0003DMT400046089 | Potato | cytosol | 53.57 | 61.54 |
| Solyc12g055920.1.1 | Tomato | cytosol, mitochondrion | 61.16 | 60.62 |
| Bra027703.1-P | Field mustard | mitochondrion | 56.7 | 59.35 |
| CDY64882 | Canola | mitochondrion | 56.25 | 58.88 |
| CDY46533 | Canola | mitochondrion | 56.25 | 58.88 |
| AT1G64480.1 | Thale cress | cytosol, mitochondrion | 56.25 | 58.88 |
| TraesCS1B01G229300.1 | Wheat | cytosol | 55.36 | 57.67 |
| TraesCS4B01G379200.1 | Wheat | cytosol | 51.34 | 56.65 |
| Solyc08g036590.1.1 | Tomato | endoplasmic reticulum, extracellular | 55.36 | 54.15 |
| TraesCS5B01G071500.1 | Wheat | cytosol | 52.23 | 52.0 |
| TraesCS5B01G124300.1 | Wheat | cytosol | 52.23 | 51.77 |
| Solyc08g054570.1.1 | Tomato | cytosol | 42.41 | 51.08 |
| TraesCS3B01G235500.1 | Wheat | cytosol | 56.25 | 43.75 |
| TraesCS3B01G064500.2 | Wheat | cytosol, golgi, mitochondrion | 56.7 | 42.91 |
| TraesCS4B01G069900.1 | Wheat | cytosol | 49.11 | 42.31 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G272000.1 | EnsemblPlantsGene:TraesCS1B01G272000 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23056 | PANTHER:PTHR23056:SF59 |
| PFAM:PF13499 | PFAM:PF13833 | PFscan:PS50222 | PRINTS:PR00450 | ScanProsite:PS00018 | SMART:SM00054 |
| SUPFAM:SSF47473 | TIGR:cd00051 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr1B:+:478053647..478056296
Molecular Weight (calculated)
25777.6 Da
IEP (calculated)
4.659
GRAVY (calculated)
-0.289
Length
224 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCVSSKQFR RAPPHEDAAL LAKETTFSLN EVEALYELFK KISYSIFKDG LIHKGQFANC HFVQQEEFQL ALFRNSNRKN LFADRIFDLF DLKRNGVIEF
101: EEFVRSLHIF HPDTPMADKI AFAFRLYDLR GTGSIEREEL KEMVLAILNE SDLLLSDDAV EQIVDQTFKQ ADLNSDGRID PDEWKEFASK NPALLKNMTL
201: PYLKDITMSF PSFVVYSGAG DEEL
101: EEFVRSLHIF HPDTPMADKI AFAFRLYDLR GTGSIEREEL KEMVLAILNE SDLLLSDDAV EQIVDQTFKQ ADLNSDGRID PDEWKEFASK NPALLKNMTL
201: PYLKDITMSF PSFVVYSGAG DEEL
001: MGCSVSKKKK KNAMRPPGYE DPELLASVTP FTVEEVEALY ELFKKLSSSI IDDGLIHKEE FQLALFRNRN RRNLFADRIF DVFDVKRNGV IEFGEFVRSL
101: GVFHPSAPVH EKVKFAFKLY DLRQTGFIER EELKEMVVAL LHESELVLSE DMIEVMVDKA FVQADRKNDG KIDIDEWKDF VSLNPSLIKN MTLPYLKDIN
201: RTFPSFVSSC EEEEMELQNV SS
101: GVFHPSAPVH EKVKFAFKLY DLRQTGFIER EELKEMVVAL LHESELVLSE DMIEVMVDKA FVQADRKNDG KIDIDEWKDF VSLNPSLIKN MTLPYLKDIN
201: RTFPSFVSSC EEEEMELQNV SS
Arabidopsis Description
CBL4Calcineurin B-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:O81223]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.