Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plasma membrane 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
GSMUA_Achr4P23000_001 | |
GSMUA_Achr4P31540_001 |
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT1G64480.1 | GSMUA_Achr4P23000_001 | AT1G30270.1 | 16814720 |
AT1G64480.1 | GSMUA_Achr4P31540_001 | AT1G30270.1 | 16814720 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d053293_P001 | Maize | cytosol | 65.09 | 71.13 |
Os02t0291000-00 | Rice | cytosol | 70.75 | 70.42 |
GSMUA_Achr1P13780_001 | Banana | cytosol | 63.21 | 68.72 |
GSMUA_Achr1P13790_001 | Banana | cytosol | 69.81 | 68.52 |
HORVU1Hr1G064470.1 | Barley | cytosol | 68.4 | 68.08 |
TraesCS1D01G261200.1 | Wheat | cytosol | 68.4 | 68.08 |
EES06704 | Sorghum | cytosol | 68.4 | 68.08 |
Os02t0291400-00 | Rice | plasma membrane | 65.57 | 65.26 |
TraesCS1B01G272000.1 | Wheat | cytosol | 68.4 | 64.73 |
TraesCS1A01G261200.1 | Wheat | cytosol | 68.4 | 64.73 |
TraesCS1D01G346500.1 | Wheat | cytosol | 65.09 | 64.19 |
TraesCS1D01G346400.1 | Wheat | cytosol | 65.09 | 64.19 |
Bra027703.1-P | Field mustard | mitochondrion | 64.15 | 63.55 |
CDY46533 | Canola | mitochondrion | 63.68 | 63.08 |
CDY64882 | Canola | mitochondrion | 63.68 | 63.08 |
TraesCS1B01G357200.1 | Wheat | cytosol | 62.74 | 61.86 |
AT1G64480.1 | Thale cress | cytosol, mitochondrion | 62.26 | 61.68 |
VIT_02s0025g01640.t01 | Wine grape | cytosol | 63.68 | 61.64 |
GSMUA_Achr4P08200_001 | Banana | cytosol | 63.21 | 61.19 |
PGSC0003DMT400046089 | Potato | cytosol | 54.25 | 58.97 |
GSMUA_AchrUn_... | Banana | cytosol | 58.49 | 58.22 |
GSMUA_Achr4P30070_001 | Banana | cytosol | 58.49 | 58.22 |
GSMUA_Achr4P26350_001 | Banana | cytosol | 58.02 | 57.75 |
Solyc12g055920.1.1 | Tomato | cytosol, mitochondrion | 59.91 | 56.19 |
Solyc08g036590.1.1 | Tomato | endoplasmic reticulum, extracellular | 56.6 | 52.4 |
GSMUA_Achr9P12840_001 | Banana | cytosol | 55.19 | 51.77 |
Solyc08g054570.1.1 | Tomato | cytosol | 44.34 | 50.54 |
GSMUA_Achr4P09270_001 | Banana | cytosol | 53.3 | 50.0 |
GSMUA_AchrUn_... | Banana | cytosol | 50.0 | 46.9 |
GSMUA_Achr3P32370_001 | Banana | cytosol | 55.19 | 44.32 |
Protein Annotations
EnsemblPlants:GSMUA_Achr3P03340_001 | EnsemblPlants:GSMUA_Achr3T03340_001 | EnsemblPlantsGene:GSMUA_Achr3G03340_001 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 |
GO:GO:0005509 | InterPro:EF-hand-dom_pair | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23056 | PANTHER:PTHR23056:SF59 |
PFAM:PF13499 | PFAM:PF13833 | PFscan:PS50222 | PRINTS:PR00450 | SMART:SM00054 | SUPFAM:SSF47473 |
UniParc:UPI0002959717 | UniProt:M0SBF2 | MapMan:35.1 | : | : | : |
Description
Calcineurin B-like protein 7 [Source:GMGC_GENE;Acc:GSMUA_Achr3G03340_001]
Coordinates
chr3:+:2180324..2188313
Molecular Weight (calculated)
24416.1 Da
IEP (calculated)
4.294
GRAVY (calculated)
-0.161
Length
212 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCISSKQKH VPGYEDPTVL ASETTFTVSE VEALYELFKR ISYSITKDGL IHKEEFRLAL LKNSNEHNFF ADRIFDLFDI KRNGVIEFGE FVRCLSIFHP
101: NTEVAEKVSF AFRLYDLKNT GYIERDELKE MVLAILSETD VCLSDDVIEA IVDKTLLQVD RNGDEKIDPE EWKEFVAQNP SLLKNMTIPY LMDITTAFPS
201: FVVMTTIDEE DM
101: NTEVAEKVSF AFRLYDLKNT GYIERDELKE MVLAILSETD VCLSDDVIEA IVDKTLLQVD RNGDEKIDPE EWKEFVAQNP SLLKNMTIPY LMDITTAFPS
201: FVVMTTIDEE DM
001: MGCSVSKKKK KNAMRPPGYE DPELLASVTP FTVEEVEALY ELFKKLSSSI IDDGLIHKEE FQLALFRNRN RRNLFADRIF DVFDVKRNGV IEFGEFVRSL
101: GVFHPSAPVH EKVKFAFKLY DLRQTGFIER EELKEMVVAL LHESELVLSE DMIEVMVDKA FVQADRKNDG KIDIDEWKDF VSLNPSLIKN MTLPYLKDIN
201: RTFPSFVSSC EEEEMELQNV SS
101: GVFHPSAPVH EKVKFAFKLY DLRQTGFIER EELKEMVVAL LHESELVLSE DMIEVMVDKA FVQADRKNDG KIDIDEWKDF VSLNPSLIKN MTLPYLKDIN
201: RTFPSFVSSC EEEEMELQNV SS
Arabidopsis Description
CBL4Calcineurin B-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:O81223]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.