Factsheet for GSMUA_Achr3P32370_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr1P03160_001
GSMUA_Achr4P29310_001
GSMUA_Achr5P10670_001
GSMUA_Achr6P31600_001
GSMUA_Achr7P16440_001
GSMUA_Achr9P10010_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G33000.1	GSMUA_Achr1P03160_001	AT3G54840.1	17825054
AT4G33000.1	GSMUA_Achr4P29310_001	AT3G54840.1	17825054
AT4G33000.1	GSMUA_Achr5P10670_001	AT3G54840.1	17825054
AT4G33000.1	GSMUA_Achr6P31600_001	AT4G19640.1	17825054
AT4G33000.1	GSMUA_Achr7P16440_001	AT4G19640.1	17825054
AT4G33000.1	GSMUA_Achr9P10010_001	AT4G19640.1	17825054
AT4G33000.1	GSMUA_Achr10P...	AT5G35410.1	17449811
AT4G33000.1	GSMUA_Achr10P...	AT5G35410.1	17825054
AT4G33000.1	GSMUA_Achr10P...	AT5G35410.1	19448033

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0008g00950.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plastid	65.15	66.67
CDX75314	Canola	cytosol, endoplasmic reticulum	62.5	66.27
Bra034543.1-P	Field mustard	cytosol	61.74	66.26
CDX68929	Canola	cytosol, endoplasmic reticulum, mitochondrion	62.12	65.86
CDY28278	Canola	cytosol	61.36	65.85
CDY45024	Canola	cytosol	61.36	65.85
Bra011404.1-P	Field mustard	cytosol, plastid	52.27	65.4
Solyc08g065330.2.1	Tomato	endoplasmic reticulum, extracellular	62.12	63.81
CDY13513	Canola	endoplasmic reticulum, nucleus, plasma membrane	52.27	63.59
CDY04300	Canola	cytosol	31.06	62.6
AT4G33000.1	Thale cress	golgi, plastid	60.61	62.5
Bra037030.1-P	Field mustard	cytosol	59.47	60.85
CDX72384	Canola	cytosol	60.61	59.93
VIT_04s0008g00960.t01	Wine grape	plastid	56.44	59.36
TraesCS3A01G053300.1	Wheat	golgi	64.77	58.56
KRH47134	Soybean	cytosol	58.33	58.56
TraesCS3B01G235500.1	Wheat	cytosol	63.64	58.33
Os01t0711500-00	Rice	plastid	58.71	58.27
TraesCS3D01G211300.1	Wheat	cytosol	63.26	57.99
KRH44162	Soybean	cytosol, extracellular	57.95	57.74
TraesCS3B01G064500.2	Wheat	cytosol, golgi, mitochondrion	64.02	57.09
KRH05482	Soybean	cytosol, plasma membrane, plastid	54.55	55.81
GSMUA_AchrUn_...	Banana	cytosol	44.7	55.4
GSMUA_Achr3P03340_001	Banana	cytosol	44.32	55.19
GSMUA_Achr1P13780_001	Banana	cytosol	40.15	54.36
GSMUA_Achr1P13790_001	Banana	cytosol	43.94	53.7
GSMUA_Achr9P12840_001	Banana	cytosol	45.83	53.54
PGSC0003DMT400076980	Potato	mitochondrion	58.71	53.45
GSMUA_Achr4P30070_001	Banana	cytosol	42.8	53.05
KXG33232	Sorghum	endoplasmic reticulum	56.82	53.0
KXG32770	Sorghum	cytosol, plastid	64.02	52.98
GSMUA_Achr4P09270_001	Banana	cytosol	45.08	52.65
GSMUA_Achr4P26350_001	Banana	cytosol	41.67	51.64
GSMUA_Achr4P08200_001	Banana	cytosol	42.8	51.6
GSMUA_AchrUn_...	Banana	cytosol	43.56	50.88
TraesCS3A01G208300.2	Wheat	cytosol, mitochondrion	65.53	47.66
Zm00001d044285_P003	Maize	plastid	64.39	47.09
Os01t0579600-01	Rice	cytosol	38.64	46.79

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	InterPro:EF-hand-dom_pair	InterPro:EF_hand_dom	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773
GO:GO:0005886	GO:GO:0006810	GO:GO:0006950	GO:GO:0008150	GO:GO:0009628	GO:GO:0009705
GO:GO:0016020	GO:GO:0016021	GO:GO:0042538	GO:GO:0043266	GO:GO:0050801	GO:GO:2000021
EnsemblPlantsGene:GSMUA_Achr3G32370_001	EnsemblPlants:GSMUA_Achr3P32370_001	EnsemblPlants:GSMUA_Achr3T32370_001	InterPro:IPR002048	UniProt:M0SJQ1	PRINTS:PR00450
PFscan:PS50222	PANTHER:PTHR23056	PANTHER:PTHR23056:SF26	SMART:SM00054	SUPFAM:SSF47473	TMHMM:TMhelix
UniParc:UPI000294821A	SEG:seg	:	:	:	:

Description

Calcineurin B-like protein 9 [Source:GMGC_GENE;Acc:GSMUA_Achr3G32370_001]

Coordinates

chr3:+:30313822..30317439

Molecular Weight (calculated)

30477.9 Da

IEP (calculated)

4.881

GRAVY (calculated)

0.033

Length

264 amino acids

Sequence
(BLAST)

001: MDHLTTDSLR SSSLTVGERL CAVFIPIIAI VEALICVVAD CFDHRSFLVR RAPPPKTFDF ARLAHDSRCF TVNEVEALYE LYKKLGNSIT TDGLIHKEEL
101: QLALLNTLTG DNLFLDRVFD LFDEKKNGVI DFEEFIHVLC VFHPCAPLDD KIEFAFRLHD LRRTGFIERK EVKQMVIAIL RESDIMLSDD LLEAILDMAC
201: HLRRLTYPCF TFAEAVNGDD KINREEWKDF VIRHPNLLKN MTLPYLKDIT TAFPSFVFNT EVEE

Best Arabidopsis Sequence Match ( AT4G33000.2 )
(BLAST)

001: MEQVSSRSSS LTVGEQFCAV FIPFFAIIDV LVSSVGQCFD CRSTSPRTCQ HADLERLARE SQFSVNEVEA LYELFKKLSC SIIDDGLIHK EELRLALFQA
101: PYGENLFLDR VFDLFDEKKN GVIEFEEFIH ALSVFHPYAS IQEKTDFAFR LYDLRQTGFI EREEVQQMVS AILLESDMML SDELLTMIID KTFADADSDK
201: DGKISKDEWN VYVHKHPSLL KNMTLPYLKD VTTAFPSFIF NTEVED

Arabidopsis Description

CBL10Calcineurin B-like 10 [Source:UniProtKB/TrEMBL;Acc:M5BEI3]
SUBAcon: [endoplasmic reticulum,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.