Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G235500.1 | Wheat | cytosol | 97.57 | 97.57 |
| TraesCS3A01G208300.2 | Wheat | cytosol, mitochondrion | 97.92 | 77.69 |
| Bra011404.1-P | Field mustard | cytosol, plastid | 52.78 | 72.04 |
| KXG32770 | Sorghum | cytosol, plastid | 78.82 | 71.16 |
| CDY04300 | Canola | cytosol | 31.94 | 70.23 |
| Os01t0579600-01 | Rice | cytosol | 52.08 | 68.81 |
| VIT_04s0008g00950.t01 | Wine grape | cytosol, endoplasmic reticulum, mitochondrion, plastid | 61.46 | 68.6 |
| CDX75314 | Canola | cytosol, endoplasmic reticulum | 59.03 | 68.27 |
| CDX68929 | Canola | cytosol, endoplasmic reticulum, mitochondrion | 59.03 | 68.27 |
| CDY45024 | Canola | cytosol | 57.99 | 67.89 |
| Bra034543.1-P | Field mustard | cytosol | 57.99 | 67.89 |
| CDY28278 | Canola | cytosol | 57.64 | 67.48 |
| Solyc08g065330.2.1 | Tomato | endoplasmic reticulum, extracellular | 59.03 | 66.15 |
| CDY13513 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 49.65 | 65.9 |
| AT4G33000.1 | Thale cress | golgi, plastid | 56.94 | 64.06 |
| Bra037030.1-P | Field mustard | cytosol | 57.29 | 63.95 |
| VIT_04s0008g00960.t01 | Wine grape | plastid | 55.21 | 63.35 |
| GSMUA_Achr3P32370_001 | Banana | cytosol | 57.99 | 63.26 |
| CDX72384 | Canola | cytosol | 57.99 | 62.55 |
| TraesCS5D01G132500.2 | Wheat | cytosol | 48.61 | 61.95 |
| Zm00001d044285_P003 | Maize | plastid | 76.39 | 60.94 |
| KRH44162 | Soybean | cytosol, extracellular | 55.9 | 60.75 |
| TraesCS1D01G261200.1 | Wheat | cytosol | 44.44 | 60.09 |
| KRH47134 | Soybean | cytosol | 54.51 | 59.7 |
| TraesCS5D01G072100.1 | Wheat | cytosol | 46.53 | 59.56 |
| TraesCS4D01G068700.1 | Wheat | cytosol | 46.18 | 59.11 |
| KRH05482 | Soybean | cytosol, plasma membrane, plastid | 52.08 | 58.14 |
| TraesCS1D01G358200.2 | Wheat | cytosol, plastid | 43.75 | 55.51 |
| TraesCS1D01G358400.1 | Wheat | mitochondrion | 42.01 | 55.5 |
| TraesCS1D01G346500.1 | Wheat | cytosol | 40.97 | 54.88 |
| TraesCS1D01G346400.1 | Wheat | cytosol | 40.97 | 54.88 |
| PGSC0003DMT400076980 | Potato | mitochondrion | 55.21 | 54.83 |
| TraesCS4D01G162400.1 | Wheat | cytosol | 32.29 | 43.66 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:26.6.1.1.3 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005773 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009628 |
| GO:GO:0009705 | GO:GO:0016020 | GO:GO:0042538 | GO:GO:0043266 | GO:GO:0050801 | InterPro:IPR002048 |
| PFAM:PF13499 | PFAM:PF13833 | PRINTS:PR00450 | ScanProsite:PS00018 | PFscan:PS50222 | PANTHER:PTHR23056 |
| PANTHER:PTHR23056:SF26 | SMART:SM00054 | SUPFAM:SSF47473 | EnsemblPlantsGene:TraesCS3D01G211300 | EnsemblPlants:TraesCS3D01G211300.1 | TIGR:cd00051 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr3D:-:282331153..282336568
Molecular Weight (calculated)
32626.9 Da
IEP (calculated)
4.700
GRAVY (calculated)
-0.099
Length
288 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSRFSSGSG DVRSGSSLTV GERLCAAFLP FVAVAEAVFF VLTDCLADIC PSSSSSSRLR REPSASYILT AKKKSHHLFR RRVGPGCISL DFGNLARLAE
101: ESRCFSVNEV EALFELYKKI SCSIIDDGLI HKEELQLALF KTPSGQNLFI DRVFDLFDEK KNGVIEFDEF IHALSVFHPC SPVEDKINFA FKLYDLRQTG
201: FIEREEVMQM VIAILNESDM KLSDELLEAI IDKTFEDADT DRDGKISQEE WKEFVLRHPN LLKNMTLPYL RDITTSFPSF VFNTAVED
101: ESRCFSVNEV EALFELYKKI SCSIIDDGLI HKEELQLALF KTPSGQNLFI DRVFDLFDEK KNGVIEFDEF IHALSVFHPC SPVEDKINFA FKLYDLRQTG
201: FIEREEVMQM VIAILNESDM KLSDELLEAI IDKTFEDADT DRDGKISQEE WKEFVLRHPN LLKNMTLPYL RDITTSFPSF VFNTAVED
001: MEQVSSRSSS LTVGEQFCAV FIPFFAIIDV LVSSVGQCFD CRSTSPRTCQ HADLERLARE SQFSVNEVEA LYELFKKLSC SIIDDGLIHK EELRLALFQA
101: PYGENLFLDR VFDLFDEKKN GVIEFEEFIH ALSVFHPYAS IQEKTDFAFR LYDLRQTGFI EREEVQQMVS AILLESDMML SDELLTMIID KTFADADSDK
201: DGKISKDEWN VYVHKHPSLL KNMTLPYLKD VTTAFPSFIF NTEVED
101: PYGENLFLDR VFDLFDEKKN GVIEFEEFIH ALSVFHPYAS IQEKTDFAFR LYDLRQTGFI EREEVQQMVS AILLESDMML SDELLTMIID KTFADADSDK
201: DGKISKDEWN VYVHKHPSLL KNMTLPYLKD VTTAFPSFIF NTEVED
Arabidopsis Description
CBL10Calcineurin B-like 10 [Source:UniProtKB/TrEMBL;Acc:M5BEI3]
SUBAcon: [endoplasmic reticulum,plastid]
SUBAcon: [endoplasmic reticulum,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.