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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • mitochondrion 1
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, endoplasmic reticulum, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX78272
CDX78945
CDX78949
CDX99356
CDY02896
CDY09323
CDY36813
CDY44603
CDY55834
CDY61658

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G33000.1 CDX78272 AT3G54840.1 17825054
AT4G33000.1 CDY02896 AT3G54840.1 17825054
AT4G33000.1 CDY55834 AT3G54840.1 17825054
AT4G33000.1 CDY61658 AT3G54840.1 17825054
AT4G33000.1 CDX78945 AT4G19640.1 17825054
AT4G33000.1 CDX78949 AT4G19640.1 17825054
AT4G33000.1 CDX99356 AT4G19640.1 17825054
AT4G33000.1 CDY09323 AT4G19640.1 17825054
AT4G33000.1 CDY36813 AT5G35410.1 17449811
AT4G33000.1 CDY44603 AT5G35410.1 17449811
AT4G33000.1 CDY36813 AT5G35410.1 17825054
AT4G33000.1 CDY44603 AT5G35410.1 17825054
AT4G33000.1 CDY36813 AT5G35410.1 19448033
AT4G33000.1 CDY44603 AT5G35410.1 19448033
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY45024 Canola cytosol 97.15 97.15
CDX75314 Canola cytosol, endoplasmic reticulum 88.21 87.15
CDX68929 Canola cytosol, endoplasmic reticulum, mitochondrion 87.8 86.75
AT4G33000.1 Thale cress golgi, plastid 86.59 83.2
CDY13513 Canola endoplasmic reticulum, nucleus, plasma membrane 72.76 82.49
CDY04300 Canola cytosol 41.87 78.63
CDX72384 Canola cytosol 84.96 78.28
VIT_04s0008g00950.t01 Wine grape cytosol, endoplasmic reticulum, mitochondrion, plastid 70.33 67.05
Solyc08g065330.2.1 Tomato endoplasmic reticulum, extracellular 68.7 65.76
VIT_04s0008g00960.t01 Wine grape plastid 65.04 63.74
CDY67196 Canola cytosol 17.48 61.43
GSMUA_Achr3P32370_001 Banana cytosol 65.85 61.36
Os01t0711500-00 Rice plastid 66.26 61.28
CDY62266 Canola cytosol 11.79 60.42
KRH44162 Soybean cytosol, extracellular 64.23 59.62
KRH47134 Soybean cytosol 62.6 58.56
CDX94315 Canola cytosol 53.25 57.96
CDX89324 Canola cytosol 53.25 57.96
CDY42728 Canola cytosol 53.25 57.96
CDX92814 Canola cytosol 53.25 57.96
TraesCS3D01G211300.1 Wheat cytosol 67.48 57.64
TraesCS3A01G053300.1 Wheat golgi 68.29 57.53
TraesCS3B01G235500.1 Wheat cytosol 67.07 57.29
CDY09616 Canola cytosol 48.78 56.34
KXG33232 Sorghum endoplasmic reticulum 64.63 56.18
TraesCS3B01G064500.2 Wheat cytosol, golgi, mitochondrion 67.48 56.08
CDX90465 Canola cytosol 48.37 55.87
KRH05482 Soybean cytosol, plasma membrane, plastid 58.54 55.81
CDY06547 Canola cytosol 51.22 55.75
CDY64981 Canola cytosol 51.22 55.75
PGSC0003DMT400076980 Potato mitochondrion 65.45 55.52
CDY28977 Canola cytosol 47.97 55.4
CDY40580 Canola cytosol 47.97 55.4
CDY19840 Canola cytosol 48.78 55.05
CDY25987 Canola cytosol 47.56 54.93
CDY69850 Canola cytosol 47.56 54.93
CDX80425 Canola cytosol 49.19 54.75
CDX78784 Canola cytosol 47.15 54.46
CDY38412 Canola cytosol 47.15 54.46
CDY64882 Canola mitochondrion 46.34 53.27
CDY46533 Canola mitochondrion 46.34 53.27
CDX87133 Canola cytosol 46.75 53.24
KXG32770 Sorghum cytosol, plastid 68.29 52.66
CDY11963 Canola cytosol 50.81 52.52
CDY36774 Canola cytosol 50.81 52.52
CDY44281 Canola cytosol 46.34 51.58
CDY59968 Canola cytosol, plasma membrane 45.94 51.13
CDY32236 Canola cytosol, extracellular 45.12 48.9
CDY34452 Canola cytosol, extracellular 44.31 48.02
Zm00001d044285_P003 Maize plastid 67.48 45.98
TraesCS3A01G208300.2 Wheat cytosol, mitochondrion 67.48 45.73
Os01t0579600-01 Rice cytosol 38.21 43.12
CDY56859 Canola cytosol 35.37 42.44
CDX92464 Canola cytosol 34.96 41.95
CDX89325 Canola plastid 44.72 40.0
CDX94316 Canola plastid 41.46 36.96
Protein Annotations
Gene3D:1.10.238.10MapMan:26.6.1.1.3GO:A0A078GUE8UniProt:A0A078GUE8EnsemblPlants:CDY28278ProteinID:CDY28278
ProteinID:CDY28278.1InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_domGO:GO:0003674GO:GO:0005488
GO:GO:0005509GO:GO:0005575GO:GO:0016020GO:GO:0016021EnsemblPlantsGene:GSBRNA2T00040018001InterPro:IPR002048
PFAM:PF13499PFAM:PF13833PRINTS:PR00450ScanProsite:PS00018PFscan:PS50222PANTHER:PTHR23056
PANTHER:PTHR23056:SF26SMART:SM00054SUPFAM:SSF47473TMHMM:TMhelixUniParc:UPI0004EC7371:
Description
BnaC03g66810DBnaC03g66810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GUE8]
Coordinates
chrLK032217:+:60593..62393
Molecular Weight (calculated)
28640.4 Da
IEP (calculated)
4.625
GRAVY (calculated)
-0.053
Length
246 amino acids
Sequence
(BLAST)
001: MDWTKVSSRS SSLTIGEQLC AVFVPFFVII DVLFSTVGQC FDCRRRRWTQ TCQHPDLTRL ALESQFSVNE VEALYELFKK LSCSIIDDGL IHKEELRLAL
101: FQAPNLFLDR VFDLFDEKKN GVIEFEEFIH VLTVFHPSAP IQEKIDFAFR LYDLRQTGFI EREEVHQMVA AILKESDMML SDELLTMIID KTFADADSDK
201: DGRISKEEWR VYVLKHPSLL KNMTLPYLKD VTTAFPSFIF NTEVED
Best Arabidopsis Sequence Match ( AT4G33000.2 )
(BLAST)
001: MEQVSSRSSS LTVGEQFCAV FIPFFAIIDV LVSSVGQCFD CRSTSPRTCQ HADLERLARE SQFSVNEVEA LYELFKKLSC SIIDDGLIHK EELRLALFQA
101: PYGENLFLDR VFDLFDEKKN GVIEFEEFIH ALSVFHPYAS IQEKTDFAFR LYDLRQTGFI EREEVQQMVS AILLESDMML SDELLTMIID KTFADADSDK
201: DGKISKDEWN VYVHKHPSLL KNMTLPYLKD VTTAFPSFIF NTEVED
Arabidopsis Description
CBL10Calcineurin B-like 10 [Source:UniProtKB/TrEMBL;Acc:M5BEI3]
SUBAcon: [endoplasmic reticulum,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.