Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX68929 | Canola | cytosol, endoplasmic reticulum, mitochondrion | 86.26 | 45.38 |
| CDX75314 | Canola | cytosol, endoplasmic reticulum | 86.26 | 45.38 |
| AT4G33000.1 | Thale cress | golgi, plastid | 83.21 | 42.58 |
| CDX72384 | Canola | cytosol | 86.26 | 42.32 |
| CDY13513 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 69.47 | 41.94 |
| CDY28278 | Canola | cytosol | 78.63 | 41.87 |
| CDY45024 | Canola | cytosol | 78.63 | 41.87 |
| Solyc08g065330.2.1 | Tomato | endoplasmic reticulum, extracellular | 76.34 | 38.91 |
| VIT_04s0008g00950.t01 | Wine grape | cytosol, endoplasmic reticulum, mitochondrion, plastid | 73.28 | 37.21 |
| VIT_04s0008g00960.t01 | Wine grape | plastid | 70.99 | 37.05 |
| PGSC0003DMT400076980 | Potato | mitochondrion | 76.34 | 34.48 |
| CDY19840 | Canola | cytosol | 56.49 | 33.95 |
| Os01t0711500-00 | Rice | plastid | 68.7 | 33.83 |
| CDX80425 | Canola | cytosol | 55.73 | 33.03 |
| Os01t0579600-01 | Rice | cytosol | 54.96 | 33.03 |
| CDX92814 | Canola | cytosol | 56.49 | 32.74 |
| CDX94315 | Canola | cytosol | 56.49 | 32.74 |
| CDX89324 | Canola | cytosol | 56.49 | 32.74 |
| CDY42728 | Canola | cytosol | 56.49 | 32.74 |
| KRH44162 | Soybean | cytosol, extracellular | 65.65 | 32.45 |
| CDX87133 | Canola | cytosol | 53.44 | 32.41 |
| CDY40580 | Canola | cytosol | 52.67 | 32.39 |
| CDY69850 | Canola | cytosol | 52.67 | 32.39 |
| CDY28977 | Canola | cytosol | 52.67 | 32.39 |
| CDY25987 | Canola | cytosol | 52.67 | 32.39 |
| CDY06547 | Canola | cytosol | 55.73 | 32.3 |
| CDY64981 | Canola | cytosol | 55.73 | 32.3 |
| TraesCS3A01G053300.1 | Wheat | golgi | 71.76 | 32.19 |
| KXG33232 | Sorghum | endoplasmic reticulum | 69.47 | 32.16 |
| TraesCS3D01G211300.1 | Wheat | cytosol | 70.23 | 31.94 |
| KRH47134 | Soybean | cytosol | 64.12 | 31.94 |
| CDY09616 | Canola | cytosol | 51.91 | 31.92 |
| KRH05482 | Soybean | cytosol, plasma membrane, plastid | 62.6 | 31.78 |
| CDX90465 | Canola | cytosol | 51.15 | 31.46 |
| TraesCS3B01G235500.1 | Wheat | cytosol | 68.7 | 31.25 |
| GSMUA_Achr3P32370_001 | Banana | cytosol | 62.6 | 31.06 |
| CDY38412 | Canola | cytosol | 50.38 | 30.99 |
| CDY44281 | Canola | cytosol | 51.91 | 30.77 |
| TraesCS3B01G064500.2 | Wheat | cytosol, golgi, mitochondrion | 69.47 | 30.74 |
| CDY11963 | Canola | cytosol | 55.73 | 30.67 |
| CDY36774 | Canola | cytosol | 55.73 | 30.67 |
| CDX78784 | Canola | cytosol | 49.62 | 30.52 |
| KXG32770 | Sorghum | cytosol, plastid | 74.05 | 30.41 |
| CDY59968 | Canola | cytosol, plasma membrane | 51.15 | 30.32 |
| CDY32236 | Canola | cytosol, extracellular | 51.15 | 29.52 |
| CDY64882 | Canola | mitochondrion | 48.09 | 29.44 |
| CDY46533 | Canola | mitochondrion | 48.09 | 29.44 |
| CDY34452 | Canola | cytosol, extracellular | 49.62 | 28.63 |
| Zm00001d044285_P003 | Maize | plastid | 74.05 | 26.87 |
| TraesCS3A01G208300.2 | Wheat | cytosol, mitochondrion | 70.23 | 25.34 |
| CDY62266 | Canola | cytosol | 9.16 | 25.0 |
| CDX89325 | Canola | plastid | 50.38 | 24.0 |
| CDY56859 | Canola | cytosol | 36.64 | 23.41 |
| CDX92464 | Canola | cytosol | 36.64 | 23.41 |
| CDX94316 | Canola | plastid | 48.09 | 22.83 |
| CDY67196 | Canola | cytosol | 9.16 | 17.14 |
Protein Annotations
| EnsemblPlants:CDY04300 | EnsemblPlantsGene:GSBRNA2T00118078001 | Gene3D:1.10.238.10 | GO:A0A078EQR3 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23056 |
| PANTHER:PTHR23056:SF26 | PFAM:PF00036 | PFscan:PS50222 | ProteinID:CDY04300 | ProteinID:CDY04300.1 | ScanProsite:PS00018 |
| SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI0004EE1745 | MapMan:35.1 | : | : |
Description
BnaC05g25620D
Coordinates
chrLK031951:+:106374..107761
Molecular Weight (calculated)
14836.7 Da
IEP (calculated)
4.091
GRAVY (calculated)
-0.040
Length
131 amino acids
Sequence
(BLAST)
(BLAST)
001: MRPSLLRGVS VNEVEALYEL FKKLSCSIID DGLIHKEELQ LALFQAPYGE NLFLDRVFDL FDENKNGVIE FEEFIHALSV FHPYAPIEEK IDCAPNGGCY
101: LMESEMIPSD GLLTMIIDKT FADADSDKDV K
101: LMESEMIPSD GLLTMIIDKT FADADSDKDV K
001: MTTGRPNNIL ALKISTRSSS LTVGEQFCAV FIPFFAIIDV LVSSVGQCFD CRSTSPRTCQ HADLERLARE SQFSVNEVEA LYELFKKLSC SIIDDGLIHK
101: EELRLALFQA PYGENLFLDR VFDLFDEKKN GVIEFEEFIH ALSVFHPYAS IQEKTDFAFR LYDLRQTGFI EREEVQQMVS AILLESDMML SDELLTMIID
201: KTFADADSDK DGKISKDEWN VYVHKHPSLL KNMTLPYLKD VTTAFPSFIF NTEVED
101: EELRLALFQA PYGENLFLDR VFDLFDEKKN GVIEFEEFIH ALSVFHPYAS IQEKTDFAFR LYDLRQTGFI EREEVQQMVS AILLESDMML SDELLTMIID
201: KTFADADSDK DGKISKDEWN VYVHKHPSLL KNMTLPYLKD VTTAFPSFIF NTEVED
Arabidopsis Description
CBL10Calcineurin B-like 10 [Source:UniProtKB/TrEMBL;Acc:M5BEI3]
SUBAcon: [golgi,plastid]
SUBAcon: [golgi,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.