Factsheet for TraesCS3B01G064500.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi, cytosol

Predictor Summary:

golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, mitochondrion
Any Predictor:	cytosol, golgi, mitochondrion
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G140700.1
TraesCS1B01G157100.1
TraesCS1D01G139500.1
TraesCS4A01G035800.1
TraesCS4A01G294600.1
TraesCS4B01G019100.2
TraesCS4B01G268600.1
TraesCS4D01G017300.1
TraesCS4D01G267900.1
TraesCS5B01G014400.1
TraesCS5D01G022200.2
TraesCS7A01G377600.1
TraesCS7B01G279300.1
TraesCS7D01G374400.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G33000.1	TraesCS1A01G140700.1	AT3G54840.1	17825054
AT4G33000.1	TraesCS1B01G157100.1	AT3G54840.1	17825054
AT4G33000.1	TraesCS1D01G139500.1	AT3G54840.1	17825054
AT4G33000.1	TraesCS4A01G035800.1	AT3G54840.1	17825054
AT4G33000.1	TraesCS4B01G268600.1	AT3G54840.1	17825054
AT4G33000.1	TraesCS4D01G267900.1	AT3G54840.1	17825054
AT4G33000.1	TraesCS4A01G294600.1	AT4G19640.1	17825054
AT4G33000.1	TraesCS4B01G019100.2	AT4G19640.1	17825054
AT4G33000.1	TraesCS4D01G017300.1	AT4G19640.1	17825054
AT4G33000.1	TraesCS5B01G014400.1	AT4G19640.1	17825054
AT4G33000.1	TraesCS5D01G022200.2	AT4G19640.1	17825054
AT4G33000.1	TraesCS7A01G377600.1	AT5G35410.1	17449811
AT4G33000.1	TraesCS7B01G279300.1	AT5G35410.1	17449811
AT4G33000.1	TraesCS7D01G374400.2	AT5G35410.1	17449811
AT4G33000.1	TraesCS7A01G377600.1	AT5G35410.1	17825054
AT4G33000.1	TraesCS7B01G279300.1	AT5G35410.1	17825054
AT4G33000.1	TraesCS7D01G374400.2	AT5G35410.1	17825054
AT4G33000.1	TraesCS7A01G377600.1	AT5G35410.1	19448033
AT4G33000.1	TraesCS7B01G279300.1	AT5G35410.1	19448033
AT4G33000.1	TraesCS7D01G374400.2	AT5G35410.1	19448033

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G053300.1	Wheat	golgi	91.55	92.81
TraesCS3B01G235500.1	Wheat	cytosol	82.09	84.38
KXG32770	Sorghum	cytosol, plastid	79.73	73.98
Bra011404.1-P	Field mustard	cytosol, plastid	52.03	72.99
CDY04300	Canola	cytosol	30.74	69.47
Os01t0579600-01	Rice	cytosol	51.01	69.27
CDX75314	Canola	cytosol, endoplasmic reticulum	58.11	69.08
CDX68929	Canola	cytosol, endoplasmic reticulum, mitochondrion	57.77	68.67
CDY45024	Canola	cytosol	56.42	67.89
Bra034543.1-P	Field mustard	cytosol	56.42	67.89
CDY28278	Canola	cytosol	56.08	67.48
VIT_04s0008g00950.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plastid	58.45	67.05
Solyc08g065330.2.1	Tomato	endoplasmic reticulum, extracellular	57.09	65.76
AT4G33000.1	Thale cress	golgi, plastid	55.74	64.45
CDY13513	Canola	endoplasmic reticulum, nucleus, plasma membrane	46.96	64.06
GSMUA_Achr3P32370_001	Banana	cytosol	57.09	64.02
VIT_04s0008g00960.t01	Wine grape	plastid	54.05	63.74
CDX72384	Canola	cytosol	57.43	63.67
Bra037030.1-P	Field mustard	cytosol	55.41	63.57
Zm00001d044285_P003	Maize	plastid	74.32	60.94
KRH44162	Soybean	cytosol, extracellular	53.72	60.0
TraesCS5B01G124300.1	Wheat	cytosol	45.61	59.73
KRH47134	Soybean	cytosol	52.7	59.32
TraesCS5B01G071500.1	Wheat	cytosol	44.26	58.22
TraesCS1B01G229300.1	Wheat	cytosol	41.89	57.67
TraesCS1B01G272000.1	Wheat	cytosol	42.91	56.7
TraesCS4B01G379200.1	Wheat	cytosol	38.85	56.65
KRH05482	Soybean	cytosol, plasma membrane, plastid	48.99	56.2
TraesCS1B01G370500.1	Wheat	cytosol	41.22	54.95
PGSC0003DMT400076980	Potato	mitochondrion	53.38	54.48
TraesCS1B01G357200.1	Wheat	cytosol	39.53	54.42
TraesCS1B01G370900.1	Wheat	mitochondrion	39.86	54.13
TraesCS1B01G370800.1	Wheat	cytosol	39.19	52.25
TraesCS1B01G370600.1	Wheat	nucleus	23.31	46.94
TraesCS4B01G069900.1	Wheat	cytosol	40.88	46.54

Protein Annotations

EnsemblPlants:TraesCS3B01G064500.2	EnsemblPlantsGene:TraesCS3B01G064500	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR23056	PANTHER:PTHR23056:SF26
PFAM:PF13202	PFAM:PF13499	PFscan:PS50222	PRINTS:PR00450	ScanProsite:PS00018	SEG:seg
SMART:SM00054	SUPFAM:SSF47473	TIGR:cd00051	MapMan:26.6.1.1.3	:	:

Description

No Description!

Coordinates

chr3B:-:35874351..35876794

Molecular Weight (calculated)

33528.1 Da

IEP (calculated)

5.924

GRAVY (calculated)

-0.078

Length

296 amino acids

Sequence
(BLAST)

001: MASRFNSRIS SGDLRSGSSL TVGERLCAVV LPFVAIAEFV FFALTDCLAG ICSPPSASSS SHPRRDPSAP SFFLTAKKGS HHHHHLLRRR VAPGCSSLSF
101: RDLARLADES RCFSVNEVEA LFELYKKISC SIINDGLIHK EELQLALFKT PSGQNLFLDR VFDLFDEKKN GVIEFEEFIH ALSVFHPLAP VEDKINFAFR
201: LYDLRQTGFI EREEVMQMVI AILNESHVEL SHDLLEAILD KTFEDADTDR DGKICQEEWK EFVLRHPKLL KNMTLPYLRD VTTAFPSFVF NTAVED

Best Arabidopsis Sequence Match ( AT4G33000.2 )
(BLAST)

001: MEQVSSRSSS LTVGEQFCAV FIPFFAIIDV LVSSVGQCFD CRSTSPRTCQ HADLERLARE SQFSVNEVEA LYELFKKLSC SIIDDGLIHK EELRLALFQA
101: PYGENLFLDR VFDLFDEKKN GVIEFEEFIH ALSVFHPYAS IQEKTDFAFR LYDLRQTGFI EREEVQQMVS AILLESDMML SDELLTMIID KTFADADSDK
201: DGKISKDEWN VYVHKHPSLL KNMTLPYLKD VTTAFPSFIF NTEVED

Arabidopsis Description

CBL10Calcineurin B-like 10 [Source:UniProtKB/TrEMBL;Acc:M5BEI3]
SUBAcon: [endoplasmic reticulum,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.