CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane, plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG91957
KRG98019
KRH03685
KRH20053
KRH20252
KRH34819

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G33000.1	KRG91957	AT3G54840.1	17825054
AT4G33000.1	KRH34819	AT3G54840.1	17825054
AT4G33000.1	KRG98019	AT4G19640.1	17825054
AT4G33000.1	KRH20053	AT4G19640.1	17825054
AT4G33000.1	KRH03685	AT5G35410.1	17449811
AT4G33000.1	KRH20252	AT5G35410.1	17449811
AT4G33000.1	KRH03685	AT5G35410.1	17825054
AT4G33000.1	KRH20252	AT5G35410.1	17825054
AT4G33000.1	KRH03685	AT5G35410.1	19448033
AT4G33000.1	KRH20252	AT5G35410.1	19448033

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04300	Canola	cytosol	31.78	62.6
Bra011404.1-P	Field mustard	cytosol, plastid	49.61	60.66
CDX75314	Canola	cytosol, endoplasmic reticulum	57.36	59.44
Bra034543.1-P	Field mustard	cytosol	56.59	59.35
CDY45024	Canola	cytosol	56.59	59.35
Solyc08g065330.2.1	Tomato	endoplasmic reticulum, extracellular	58.91	59.14
CDX68929	Canola	cytosol, endoplasmic reticulum, mitochondrion	56.98	59.04
CDY28278	Canola	cytosol	55.81	58.54
CDY13513	Canola	endoplasmic reticulum, nucleus, plasma membrane	48.45	57.6
AT4G33000.1	Thale cress	golgi, plastid	56.2	56.64
KRH47134	Soybean	cytosol	55.81	54.75
Bra037030.1-P	Field mustard	cytosol	54.65	54.65
GSMUA_Achr3P32370_001	Banana	cytosol	55.81	54.55
KRH44162	Soybean	cytosol, extracellular	55.81	54.34
CDX72384	Canola	cytosol	56.2	54.31
KRH64445	Soybean	cytosol	46.9	54.26
KRH53498	Soybean	cytosol	46.51	53.81
Os01t0711500-00	Rice	plastid	54.65	53.01
KRH01928	Soybean	cytosol	46.12	52.65
KRH51220	Soybean	endoplasmic reticulum	45.74	52.21
TraesCS3D01G211300.1	Wheat	cytosol	58.14	52.08
PGSC0003DMT400076980	Potato	mitochondrion	58.14	51.72
TraesCS3B01G235500.1	Wheat	cytosol	57.36	51.39
KRH57533	Soybean	mitochondrion	42.25	51.17
KRH46425	Soybean	endoplasmic reticulum	44.57	50.88
KRG98442	Soybean	cytosol	44.57	50.88
TraesCS3A01G053300.1	Wheat	golgi	57.36	50.68
KXG33232	Sorghum	endoplasmic reticulum	55.43	50.53
KRH28207	Soybean	cytosol	40.7	49.53
TraesCS3B01G064500.2	Wheat	cytosol, golgi, mitochondrion	56.2	48.99
KRH04244	Soybean	cytosol	40.7	47.95
KXG32770	Sorghum	cytosol, plastid	57.75	46.71
KRH60052	Soybean	cytosol	41.47	46.52
KRH36643	Soybean	cytosol	40.31	46.02
KRH41326	Soybean	cytosol	41.47	45.53
TraesCS3A01G208300.2	Wheat	cytosol, mitochondrion	57.75	41.05
Zm00001d044285_P003	Maize	plastid	56.59	40.44
Os01t0579600-01	Rice	cytosol	34.11	40.37

Protein Annotations

Gene3D:1.10.238.10	EntrezGene:100810494	MapMan:26.6.1.1.3	UniProt:A0A0R0FHA0	EMBL:ACUP02010746	InterPro:EF-hand-dom_pair
InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	EnsemblPlantsGene:GLYMA_17G229500	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
InterPro:IPR002048	EnsemblPlants:KRH05482	ProteinID:KRH05482	ProteinID:KRH05482.1	PFAM:PF00036	PFAM:PF13499
PRINTS:PR00450	ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR23056	PANTHER:PTHR23056:SF26	SMART:SM00054
SUPFAM:SSF47473	UniParc:UPI000189DA87	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr17:-:38444163..38448331

Molecular Weight (calculated)

29257.1 Da

IEP (calculated)

4.444

GRAVY (calculated)

0.093

Length

258 amino acids

Sequence
(BLAST)

001: MSSTIATDSH GLSDSWTIGE RVCAALMPLI AVVEVLILTV TGCFSYCPCI SIIDQNHKCT YTAKDFAILA DETRFTVEEV EALHVLFKRL SSSLIDDDSI
101: HKEELQLALF QTPYGKNLFL DRVFDVFDQK RNGVIEFDEF VHALSVFHPY APMDEKIDFA FKLYDLRQTG FIEPEEVKLM VVAILIEFDM NLPDDLLEAI
201: VHKTIADADK DNDGKISRED WKAFVSRNPS LLINMTLPYL KDITSVLSSF VFKTEAKP

Best Arabidopsis Sequence Match ( AT4G33000.2 )
(BLAST)

001: MEQVSSRSSS LTVGEQFCAV FIPFFAIIDV LVSSVGQCFD CRSTSPRTCQ HADLERLARE SQFSVNEVEA LYELFKKLSC SIIDDGLIHK EELRLALFQA
101: PYGENLFLDR VFDLFDEKKN GVIEFEEFIH ALSVFHPYAS IQEKTDFAFR LYDLRQTGFI EREEVQQMVS AILLESDMML SDELLTMIID KTFADADSDK
201: DGKISKDEWN VYVHKHPSLL KNMTLPYLKD VTTAFPSFIF NTEVED

Arabidopsis Description

CBL10Calcineurin B-like 10 [Source:UniProtKB/TrEMBL;Acc:M5BEI3]
SUBAcon: [endoplasmic reticulum,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.