Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- plasma membrane 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH57533 | Soybean | mitochondrion | 84.47 | 86.85 |
| Bra012655.1-P | Field mustard | cytosol | 70.32 | 72.3 |
| CDX90465 | Canola | cytosol | 70.32 | 72.3 |
| CDY09616 | Canola | cytosol | 69.41 | 71.36 |
| CDY38412 | Canola | cytosol | 68.95 | 70.89 |
| VIT_02s0236g00140.t01 | Wine grape | cytosol | 68.95 | 70.89 |
| Bra040169.1-P | Field mustard | cytosol | 68.95 | 70.89 |
| CDX78784 | Canola | cytosol | 68.49 | 70.42 |
| AT5G47100.1 | Thale cress | cytosol | 68.04 | 69.95 |
| Bra022104.1-P | Field mustard | cytosol | 67.58 | 69.48 |
| CDY28977 | Canola | cytosol | 67.58 | 69.48 |
| Solyc08g077770.2.1 | Tomato | cytosol | 67.58 | 69.48 |
| PGSC0003DMT400011576 | Potato | cytosol | 67.58 | 69.48 |
| Os10t0564800-01 | Rice | plasma membrane | 67.12 | 69.01 |
| CDY25987 | Canola | cytosol | 66.67 | 68.54 |
| CDY40580 | Canola | cytosol | 66.67 | 68.54 |
| CDY69850 | Canola | cytosol | 66.67 | 68.54 |
| Bra017504.1-P | Field mustard | cytosol | 66.67 | 68.54 |
| GSMUA_AchrUn_... | Banana | cytosol | 66.67 | 68.54 |
| PGSC0003DMT400068352 | Potato | cytosol | 67.12 | 68.37 |
| EER94470 | Sorghum | cytosol | 65.75 | 67.61 |
| Zm00001d029976_P004 | Maize | cytosol, mitochondrion | 65.3 | 67.14 |
| KRH28207 | Soybean | cytosol | 64.84 | 66.98 |
| VIT_02s0236g00150.t01 | Wine grape | cytosol | 68.04 | 66.82 |
| GSMUA_Achr4P26350_001 | Banana | cytosol | 64.38 | 66.2 |
| GSMUA_Achr4P30070_001 | Banana | cytosol | 64.38 | 66.2 |
| TraesCSU01G178500.1 | Wheat | cytosol | 64.84 | 66.05 |
| TraesCS1B01G229300.1 | Wheat | cytosol | 64.84 | 66.05 |
| TraesCS1A01G215800.1 | Wheat | cytosol | 64.84 | 66.05 |
| Solyc08g007160.2.1 | Tomato | cytosol | 64.84 | 66.05 |
| Solyc06g060980.1.1 | Tomato | cytosol, mitochondrion | 64.84 | 66.05 |
| HORVU1Hr1G055300.1 | Barley | cytosol | 64.84 | 66.05 |
| TraesCSU01G129500.1 | Wheat | cytosol, mitochondrion | 64.84 | 65.74 |
| HORVU4Hr1G090270.10 | Barley | cytosol | 64.84 | 65.44 |
| TraesCS5A01G545500.2 | Wheat | cytosol | 63.93 | 65.12 |
| TraesCS4B01G379200.1 | Wheat | cytosol | 59.36 | 64.04 |
| KRH64445 | Soybean | cytosol | 57.53 | 56.5 |
| AT4G17615.3 | Thale cress | cytosol | 64.84 | 56.35 |
| KRH53498 | Soybean | cytosol | 56.62 | 55.61 |
| KRH01928 | Soybean | cytosol | 57.08 | 55.31 |
| KRH51220 | Soybean | endoplasmic reticulum | 56.62 | 54.87 |
| KRG98442 | Soybean | cytosol | 56.16 | 54.42 |
| KRH46425 | Soybean | endoplasmic reticulum | 56.16 | 54.42 |
| Zm00001d000046_P001 | Maize | cytosol | 43.38 | 53.98 |
| PGSC0003DMT400052805 | Potato | cytosol | 60.27 | 50.57 |
| KRH36643 | Soybean | cytosol | 51.14 | 49.56 |
| KRH60052 | Soybean | cytosol | 49.32 | 46.96 |
| KRH41326 | Soybean | cytosol | 47.95 | 44.68 |
| KRH05482 | Soybean | cytosol, plasma membrane, plastid | 47.95 | 40.7 |
| KRH47134 | Soybean | cytosol | 47.49 | 39.54 |
| KRH44162 | Soybean | cytosol, extracellular | 47.49 | 39.25 |
Protein Annotations
| Gene3D:1.10.238.10 | EntrezGene:100811767 | MapMan:35.1 | EMBL:ACUP02010393 | InterPro:EF-hand-dom_pair | InterPro:EF_hand_dom |
| EnsemblPlantsGene:GLYMA_17G149000 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 | InterPro:IPR002048 | UniProt:K7MLR0 |
| EnsemblPlants:KRH04244 | ProteinID:KRH04244 | ProteinID:KRH04244.1 | ProteinID:KRH04245.1 | PFAM:PF13499 | PRINTS:PR00450 |
| PFscan:PS50222 | PANTHER:PTHR23056 | PANTHER:PTHR23056:SF41 | SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI000233F23B |
Description
hypothetical protein
Coordinates
chr17:+:12354773..12359193
Molecular Weight (calculated)
25244.3 Da
IEP (calculated)
4.722
GRAVY (calculated)
-0.117
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCMNSKSVR KFPAREDSLD LAAETAFTVN EVEALFVLFR SISNSIVNDG LLSKEEFQLA IFKNKKKDNI FANRIFDLFD VKKLGVVDFE DFVRSLNVFH
101: PNASLKDKIA FSFRLYDLHN TGFIERPEVK EMLIALLFES DMKLADDVIE TILDKTFVEA DLKQDGKIDT EEWETFVKRN PSVLKIMTLP YLRDITISFP
201: SFIFNSTNVE RVDETSTRL
101: PNASLKDKIA FSFRLYDLHN TGFIERPEVK EMLIALLFES DMKLADDVIE TILDKTFVEA DLKQDGKIDT EEWETFVKRN PSVLKIMTLP YLRDITISFP
201: SFIFNSTNVE RVDETSTRL
001: MGCFHSKAAK EFRGHEDPVK LASETAFSVS EVEALFELFK SISSSVVDDG LINKEEFQLA LFKSRKRENI FANRIFDMFD VKRKGVIDFG DFVRSLNVFH
101: PNASLEDKID FTFRLYDMDC TGYIERQEVK QMLIALLCES EMKLADETIE IILDKTFEDA DVNQDGKIDK LEWSDFVNKN PSLLKIMTLP YLRDITTTFP
201: SFVFHSEVDE IAT
101: PNASLEDKID FTFRLYDMDC TGYIERQEVK QMLIALLCES EMKLADETIE IILDKTFEDA DVNQDGKIDK LEWSDFVNKN PSLLKIMTLP YLRDITTTFP
201: SFVFHSEVDE IAT
Arabidopsis Description
CBL1calcineurin B-like protein 1 [Source:TAIR;Acc:AT4G17615]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.