Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G24400.1 | KRH04244 | AT5G47100.1 | 14730064 |
| AT4G24400.1 | KRH28207 | AT5G47100.1 | 14730064 |
| AT4G24400.1 | KRH57533 | AT5G47100.1 | 14730064 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH52875 | Soybean | cytosol | 79.58 | 51.57 |
| KRH62165 | Soybean | cytosol | 78.55 | 50.9 |
| KRH72505 | Soybean | cytosol | 74.39 | 48.42 |
| VIT_18s0001g07980.t01 | Wine grape | cytosol | 74.74 | 48.32 |
| PGSC0003DMT400016336 | Potato | cytosol | 71.63 | 46.31 |
| Solyc04g076810.2.1 | Tomato | cytosol | 71.28 | 46.09 |
| AT4G24400.1 | Thale cress | cytosol | 70.93 | 46.07 |
| CDY68878 | Canola | cytosol, plastid | 69.9 | 45.29 |
| TraesCS3D01G203000.4 | Wheat | cytosol | 69.9 | 44.99 |
| Os01t0536000-01 | Rice | cytosol | 69.2 | 44.84 |
| Zm00001d000080_P007 | Maize | cytosol | 69.9 | 44.79 |
| TraesCS3B01G225800.1 | Wheat | cytosol | 69.55 | 44.77 |
| TraesCS3A01G200900.1 | Wheat | cytosol | 69.55 | 44.77 |
| CDY03449 | Canola | cytosol | 69.9 | 44.59 |
| KXG32670 | Sorghum | cytosol | 69.9 | 44.49 |
| Bra013799.1-P | Field mustard | cytosol | 61.94 | 42.93 |
| KRH44935 | Soybean | cytosol | 38.06 | 39.86 |
| KRH03685 | Soybean | cytosol | 59.52 | 38.56 |
| KRH20252 | Soybean | cytosol | 58.48 | 37.89 |
| Zm00001d044553_P006 | Maize | cytosol, plasma membrane, plastid | 62.63 | 36.13 |
| KRH37794 | Soybean | cytosol | 56.75 | 35.5 |
| KRH68952 | Soybean | cytosol | 52.94 | 34.77 |
| KRH47824 | Soybean | cytosol | 52.6 | 34.7 |
| KRH73488 | Soybean | cytosol | 56.4 | 34.53 |
| KRH06391 | Soybean | cytosol | 52.25 | 34.47 |
| KRH14660 | Soybean | cytosol | 55.02 | 34.42 |
| GSMUA_Achr4P13410_001 | Banana | cytosol, mitochondrion | 72.32 | 32.5 |
| KRH12685 | Soybean | cytosol | 49.13 | 32.49 |
| KRH19498 | Soybean | cytosol | 49.83 | 32.29 |
| KRH02470 | Soybean | cytosol | 49.83 | 32.14 |
| KRH37641 | Soybean | cytosol | 49.83 | 32.14 |
| KRH15841 | Soybean | cytosol | 28.03 | 31.52 |
| KRH02907 | Soybean | cytosol | 46.37 | 28.69 |
| KRH42588 | Soybean | cytoskeleton, cytosol, nucleus | 40.14 | 25.78 |
| KRH18445 | Soybean | cytosol, endoplasmic reticulum | 41.52 | 23.3 |
| KRH01228 | Soybean | cytosol, nucleus | 41.18 | 23.15 |
| KRH44934 | Soybean | cytosol, endoplasmic reticulum, nucleus | 40.48 | 22.94 |
| KRH45118 | Soybean | plasma membrane | 25.26 | 15.63 |
| KRH12829 | Soybean | cytosol | 11.07 | 11.72 |
Protein Annotations
| Gene3D:1.10.510.10 | EntrezGene:100784566 | MapMan:18.4.5.3 | Gene3D:3.30.200.20 | EMBL:ACUP02011623 | EMBL:BT093996 |
| UniProt:C6T936 | EnsemblPlantsGene:GLYMA_19G040400 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 |
| GO:GO:0004674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016301 |
| GO:GO:0016740 | GO:GO:0019538 | GO:GO:0035556 | InterPro:IPR000719 | EnsemblPlants:KRG93778 | ProteinID:KRG93778 |
| ProteinID:KRG93778.1 | InterPro:Kinase-like_dom_sf | PFAM:PF00069 | PIRSF:PIRSF000654 | ScanProsite:PS00108 | PFscan:PS50011 |
| PANTHER:PTHR24343 | PANTHER:PTHR24343:SF157 | InterPro:Prot_kinase_dom | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS |
| TMHMM:TMhelix | UniParc:UPI0001B164DC | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr19:-:5826182..5829696
Molecular Weight (calculated)
32864.2 Da
IEP (calculated)
7.208
GRAVY (calculated)
0.101
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MTRCQRCCRY CLFLCHTTLL LVLLVSLLVF LWLNGEGTFA EVKFAQNTGT GEIVAMKVLD RSTIIKHKMV DQIKREISIM KLVRHPDVVR LHEVLASRTK
101: LYIILEFITG GELFDKIIHH GRLSEADSRR YFQQLIDGVD YCHSKGVYHR DLKPENLLLD SLGNIKIFDF GLSAFPEQGV SILRTTCGTP NYVAPKVLSH
201: KSYNGAVADV WSCGVILFLL LAGYLPFDEL DLTTLYSKIE RTEFSCPLWY PVGAKMLIYR ILDPNPETIE TFTKVGQLEK ASDAEEYSS
101: LYIILEFITG GELFDKIIHH GRLSEADSRR YFQQLIDGVD YCHSKGVYHR DLKPENLLLD SLGNIKIFDF GLSAFPEQGV SILRTTCGTP NYVAPKVLSH
201: KSYNGAVADV WSCGVILFLL LAGYLPFDEL DLTTLYSKIE RTEFSCPLWY PVGAKMLIYR ILDPNPETIE TFTKVGQLEK ASDAEEYSS
001: MNRRQQVKRR VGKYEVGRTI GEGTFAKVKF ARNSETGEPV ALKILDKEKV LKHKMAEQIR REIATMKLIK HPNVVQLYEV MASKTKIFII LEYVTGGELF
101: DKIVNDGRMK EDEARRYFQQ LIHAVDYCHS RGVYHRDLKP ENLLLDSYGN LKISDFGLSA LSQQVRDDGL LHTSCGTPNY VAPEVLNDRG YDGATADMWS
201: CGVVLYVLLA GYLPFDDSNL MNLYKKISSG EFNCPPWLSL GAMKLITRIL DPNPMTVSNF YMLIYPSK
101: DKIVNDGRMK EDEARRYFQQ LIHAVDYCHS RGVYHRDLKP ENLLLDSYGN LKISDFGLSA LSQQVRDDGL LHTSCGTPNY VAPEVLNDRG YDGATADMWS
201: CGVVLYVLLA GYLPFDDSNL MNLYKKISSG EFNCPPWLSL GAMKLITRIL DPNPMTVSNF YMLIYPSK
Arabidopsis Description
CIPK3Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:F4IVM7]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.