Factsheet for TraesCS3D01G203000.4

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G215800.1
TraesCS1B01G229300.1
TraesCS4B01G379200.1
TraesCS5A01G545500.2
TraesCSU01G129500.1
TraesCSU01G178500.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G24400.1	TraesCS1A01G215800.1	AT5G47100.1	14730064
AT4G24400.1	TraesCS1B01G229300.1	AT5G47100.1	14730064
AT4G24400.1	TraesCS4B01G379200.1	AT5G47100.1	14730064
AT4G24400.1	TraesCS5A01G545500.2	AT5G47100.1	14730064
AT4G24400.1	TraesCSU01G129500.1	AT5G47100.1	14730064
AT4G24400.1	TraesCSU01G178500.1	AT5G47100.1	14730064

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G225800.1	Wheat	cytosol	98.44	98.44
TraesCS3A01G200900.1	Wheat	cytosol	98.44	98.44
Os01t0536000-01	Rice	cytosol	90.65	91.26
Zm00001d000080_P007	Maize	cytosol	89.31	88.91
KXG32670	Sorghum	cytosol	89.31	88.33
Zm00001d044553_P006	Maize	cytosol, plasma membrane, plastid	84.63	75.85
KRH62165	Soybean	cytosol	75.06	75.56
VIT_18s0001g07980.t01	Wine grape	cytosol	75.06	75.39
KRH52875	Soybean	cytosol	74.83	75.34
PGSC0003DMT400016336	Potato	cytosol	74.83	75.17
Solyc04g076810.2.1	Tomato	cytosol	74.16	74.5
KRH72505	Soybean	cytosol	72.83	73.65
AT4G24400.1	Thale cress	cytosol	72.61	73.26
CDY68878	Canola	cytosol, plastid	71.49	71.97
Bra013799.1-P	Field mustard	cytosol	66.37	71.46
CDY03449	Canola	cytosol	71.27	70.64
KRG93778	Soybean	endoplasmic reticulum, plasma membrane, vacuole	44.99	69.9
TraesCS7D01G374400.2	Wheat	mitochondrion	60.58	60.99
TraesCS2D01G252600.1	Wheat	cytosol	56.12	55.63
TraesCS4D01G126200.1	Wheat	cytosol	54.34	55.58
GSMUA_Achr4P13410_001	Banana	cytosol, mitochondrion	76.84	53.65
TraesCS4D01G179700.2	Wheat	mitochondrion	52.56	52.56
TraesCS4D01G316500.1	Wheat	cytosol	51.67	52.13
TraesCS2D01G097700.1	Wheat	cytosol, mitochondrion	51.22	51.45
TraesCS2D01G155700.1	Wheat	cytosol	42.98	42.79
TraesCS1D01G082600.1	Wheat	cytosol	43.65	42.06
TraesCS6D01G141000.1	Wheat	cytosol	41.65	41.93
TraesCS1D01G082200.1	Wheat	cytosol	42.09	40.65
TraesCS1D01G082500.1	Wheat	cytosol	43.21	40.42
TraesCS3D01G492100.1	Wheat	cytosol	26.73	39.74
TraesCS1D01G353300.1	Wheat	cytosol	33.18	29.8
TraesCS4D01G196100.1	Wheat	cytosol	32.74	28.88
TraesCS3D01G282800.1	Wheat	cytosol	32.07	28.63
TraesCS3D01G491900.2	Wheat	plasma membrane	31.18	23.81
TraesCS3D01G491800.1	Wheat	mitochondrion	15.37	21.97

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:18.4.5.3	MapMan:26.6.1.1.2	Gene3D:3.30.200.20	Gene3D:3.30.310.80	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010167	GO:GO:0016020
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0046777	GO:GO:0048364	InterPro:IPR000719
InterPro:IPR018451	InterPro:Kinase-like_dom_sf	InterPro:NAF/FISL_domain	InterPro:NAF_dom	PFAM:PF00069	PFAM:PF03822
PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50816	PANTHER:PTHR24343
PANTHER:PTHR24343:SF157	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
EnsemblPlantsGene:TraesCS3D01G203000	EnsemblPlants:TraesCS3D01G203000.4	TIGR:cd12195	SEG:seg	:	:

Description

No Description!

Coordinates

chr3D:+:250915009..250932780

Molecular Weight (calculated)

50592.7 Da

IEP (calculated)

7.652

GRAVY (calculated)

-0.326

Length

449 amino acids

Sequence
(BLAST)

001: MIGGGGGGAL RRVGKYEVGR TIGEGTFAKV KFAQNTETGE SVAMKVLDRS SILKHKMVDQ IKREISIMKL VRHPNVVRLH EVLASRKKIF IILEFITGGE
101: LFDKIIRHGR LSEADARKYF QQLIDGVDFC HSKGVYHRDL KPENLLLDSQ GNLKISDFGL SAWPAQGAAL LRTTCGTPNY VAPEVLSHKG YDGALADTWS
201: CGVILYVLLA GYLPFDEVDL TTLYGKIESA EYSFPAVFPS GAKSLIRRIL DPSPDTRIRI EEIRKDEWFK KNYEPVRELE NEEVNLDDVN AAFDDPEEDN
301: QHTFDDEAGP LTLNAFDLII LSQGLNLSAL FDRRQDYGKL QNRFLSRKPA NVILSSMEVV AQSMGFKTHI RNYKMRVEGP NANKTSHLTI MLQIFEVAPS
401: IFMVELERSA GDTSEYNKFV NNYCSKLDDI IWKVSAEKGK SRTSRLSKR

Best Arabidopsis Sequence Match ( AT4G24400.1 )
(BLAST)

001: MVVRKVGKYE LGRTIGEGTF AKVKFAQNTE TGESVAMKIV DRSTIIKRKM VDQIKREISI MKLVRHPCVV RLYEVLASRT KIYIILEYIT GGELFDKIVR
101: NGRLSESEAR KYFHQLIDGV DYCHSKGVYH RDLKPENLLL DSQGNLKISD FGLSALPEQG VTILKTTCGT PNYVAPEVLS HKGYNGAVAD IWSCGVILYV
201: LMAGYLPFDE MDLPTLYSKI DKAEFSCPSY FALGAKSLIN RILDPNPETR ITIAEIRKDE WFLKDYTPVQ LIDYEHVNLD DVYAAFDDPE EQTYAQDGTR
301: DTGPLTLNAF DLIILSQGLN LATLFDRGKD SMKHQTRFIS HKPANVVLSS MEVVSQSMGF KTHIRNYKMR VEGLSANKTS HFSVILEVFK VAPSILMVDI
401: QNAAGDAEEY LKFYKTFCSK LDDIIWKPPD ASMRNRVTKA KSKRR

Arabidopsis Description

CIPK8CBL-interacting serine/threonine-protein kinase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9STV4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.