CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH04244
KRH28207
KRH57533

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G24400.1	KRH04244	AT5G47100.1	14730064
AT4G24400.1	KRH28207	AT5G47100.1	14730064
AT4G24400.1	KRH57533	AT5G47100.1	14730064

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH62165	Soybean	cytosol	87.84	87.44
KRH52875	Soybean	cytosol	87.61	87.22
VIT_18s0001g07980.t01	Wine grape	cytosol	82.43	81.88
PGSC0003DMT400016336	Potato	cytosol	80.63	80.09
Solyc04g076810.2.1	Tomato	cytosol	80.41	79.87
AT4G24400.1	Thale cress	cytosol	77.93	77.75
CDY68878	Canola	cytosol, plastid	77.03	76.68
Bra013799.1-P	Field mustard	cytosol	71.17	75.78
CDY03449	Canola	cytosol	77.03	75.5
KRG93778	Soybean	endoplasmic reticulum, plasma membrane, vacuole	48.42	74.39
Os01t0536000-01	Rice	cytosol	74.55	74.22
KXG32670	Sorghum	cytosol	75.23	73.57
Zm00001d000080_P007	Maize	cytosol	74.32	73.17
TraesCS3D01G203000.4	Wheat	cytosol	73.65	72.83
TraesCS3B01G225800.1	Wheat	cytosol	73.42	72.61
TraesCS3A01G200900.1	Wheat	cytosol	72.75	71.94
KRH03685	Soybean	cytosol	64.41	64.13
KRH20252	Soybean	cytosol	63.29	63.0
Zm00001d044553_P006	Maize	cytosol, plasma membrane, plastid	69.82	61.88
GSMUA_Achr4P13410_001	Banana	cytosol, mitochondrion	76.35	52.72
KRH47824	Soybean	cytosol	51.8	52.51
KRH06391	Soybean	cytosol	51.58	52.28
KRH14660	Soybean	cytosol	53.6	51.52
KRH37794	Soybean	cytosol	52.93	50.87
KRH73488	Soybean	cytosol	53.6	50.42
KRH68952	Soybean	cytosol	49.77	50.23
KRH37641	Soybean	cytosol	45.5	45.09
KRH12685	Soybean	cytosol	44.37	45.08
KRH19498	Soybean	cytosol	44.59	44.39
KRH44935	Soybean	cytosol	27.25	43.84
KRH02470	Soybean	cytosol	44.14	43.75
KRH02907	Soybean	cytosol	44.37	42.18
KRH15841	Soybean	cytosol	22.3	38.52
KRH42588	Soybean	cytoskeleton, cytosol, nucleus	36.49	36.0
KRH12829	Soybean	cytosol	20.5	33.33
KRH45118	Soybean	plasma membrane	30.63	29.12
KRH44934	Soybean	cytosol, endoplasmic reticulum, nucleus	33.11	28.82
KRH01228	Soybean	cytosol, nucleus	33.33	28.79
KRH18445	Soybean	cytosol, endoplasmic reticulum	33.11	28.54

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
EntrezGene:100816735	MapMan:18.4.5.3	MapMan:26.6.1.1.2	Gene3D:3.30.200.20	Gene3D:3.30.310.80	UniProt:A0A0R4J2Q6
EMBL:ACUP02001217	EnsemblPlantsGene:GLYMA_02G217300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR018451	EnsemblPlants:KRH72505	ProteinID:KRH72505
ProteinID:KRH72505.1	InterPro:Kinase-like_dom_sf	InterPro:NAF/FISL_domain	InterPro:NAF_dom	PFAM:PF00069	PFAM:PF03822
PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50816	PANTHER:PTHR24343
PANTHER:PTHR24343:SF157	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0001B64290	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:40416767..40423408

Molecular Weight (calculated)

50451.6 Da

IEP (calculated)

6.520

GRAVY (calculated)

-0.284

Length

444 amino acids

Sequence
(BLAST)

001: MVLRKVGKYE IGRTVGEGTF AKVKFAQNTE SGESVAMKVL DRSAIIKHKM VDQIKREISI MKLVRHPYVV RLHEVLASRT KIYIILEFIT GGELFDKIVS
101: HGRLSEAESR RYFQQLIDGV DFCHSKGVYH RDLKPENLLL DSQGNIKISD FGLSAFPEQG VSLLRTTCGT PNYVAPEVLS HKGYNGAPAD VWSCGVILYV
201: LLAGYLPFDE LDLTTLYSKI EKAQFSCPPS FPVGAKSLIH TMLDPNPERR ITIEQIRNDE WFQKEYVPVS LIEYEDVNLD DVNAAFDNDE DQRTNQQCEN
301: DDMGPLTLNA FDMIILSQGL NLATLFDRGQ DSMKYETRFI SQKPPKVILS SMEVVAQSMG FKTHIRNYKM RIESISTNKA SYFSVILEVF EIAPTFFMVD
401: IQKAAGDAGE YLKFYKNFSS NLEDIMWKPP HETSKLRNSK TKGQ

Best Arabidopsis Sequence Match ( AT4G24400.1 )
(BLAST)

001: MVVRKVGKYE LGRTIGEGTF AKVKFAQNTE TGESVAMKIV DRSTIIKRKM VDQIKREISI MKLVRHPCVV RLYEVLASRT KIYIILEYIT GGELFDKIVR
101: NGRLSESEAR KYFHQLIDGV DYCHSKGVYH RDLKPENLLL DSQGNLKISD FGLSALPEQG VTILKTTCGT PNYVAPEVLS HKGYNGAVAD IWSCGVILYV
201: LMAGYLPFDE MDLPTLYSKI DKAEFSCPSY FALGAKSLIN RILDPNPETR ITIAEIRKDE WFLKDYTPVQ LIDYEHVNLD DVYAAFDDPE EQTYAQDGTR
301: DTGPLTLNAF DLIILSQGLN LATLFDRGKD SMKHQTRFIS HKPANVVLSS MEVVSQSMGF KTHIRNYKMR VEGLSANKTS HFSVILEVFK VAPSILMVDI
401: QNAAGDAEEY LKFYKTFCSK LDDIIWKPPD ASMRNRVTKA KSKRR

Arabidopsis Description

CIPK8CBL-interacting serine/threonine-protein kinase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9STV4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.