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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
EER94470

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G24400.1 EER94470 AT5G47100.1 14730064
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d000080_P007 Maize cytosol 96.48 97.12
Os01t0536000-01 Rice cytosol 89.21 90.81
TraesCS3D01G203000.4 Wheat cytosol 88.33 89.31
TraesCS3A01G200900.1 Wheat cytosol 88.11 89.09
TraesCS3B01G225800.1 Wheat cytosol 87.89 88.86
Zm00001d044553_P006 Maize cytosol, plasma membrane, plastid 91.85 83.23
KRH62165 Soybean cytosol 75.55 76.91
KRH52875 Soybean cytosol 74.89 76.23
PGSC0003DMT400016336 Potato cytosol 74.23 75.39
KRH72505 Soybean cytosol 73.57 75.23
Solyc04g076810.2.1 Tomato cytosol 73.57 74.72
VIT_18s0001g07980.t01 Wine grape cytosol 72.69 73.83
AT4G24400.1 Thale cress cytosol 72.03 73.48
CDY68878 Canola cytosol, plastid 70.93 72.2
Bra013799.1-P Field mustard cytosol 65.86 71.7
CDY03449 Canola cytosol 70.7 70.86
KRG93778 Soybean endoplasmic reticulum, plasma membrane, vacuole 44.49 69.9
EER90021 Sorghum cytosol 61.89 62.58
OQU82814 Sorghum cytosol 55.29 57.05
EES16537 Sorghum cytosol 49.78 56.08
OQU88438 Sorghum cytosol, mitochondrion 51.98 54.76
EER92947 Sorghum cytosol, plastid 53.52 54.36
GSMUA_Achr4P13410_001 Banana cytosol, mitochondrion 76.43 53.97
EER92350 Sorghum cytosol, mitochondrion 52.86 53.45
KXG37001 Sorghum cytosol, mitochondrion 51.54 52.23
EES00612 Sorghum cytosol 46.04 45.14
EER97615 Sorghum cytosol 42.73 43.69
OQU77359 Sorghum cytosol, mitochondrion 42.51 41.87
EES19859 Sorghum cytosol 34.14 30.75
EES01406 Sorghum cytosol 33.48 30.46
KXG39612 Sorghum cytosol 34.36 30.41
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:18.4.5.3MapMan:26.6.1.1.2Gene3D:3.30.200.20Gene3D:3.30.310.80UniProt:A0A1B6Q433GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006464GO:GO:0006468GO:GO:0007154
GO:GO:0007165GO:GO:0007275GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0010167
GO:GO:0016020GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538GO:GO:0046777
GO:GO:0048364InterPro:IPR000719InterPro:IPR018451EnsemblPlants:KXG32670ProteinID:KXG32670ProteinID:KXG32670.1
InterPro:Kinase-like_dom_sfInterPro:NAF/FISL_domainInterPro:NAF_domPFAM:PF00069PFAM:PF03822PIRSF:PIRSF000654
ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS50816PANTHER:PTHR24343PANTHER:PTHR24343:SF157
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220EnsemblPlantsGene:SORBI_3003G181800SUPFAM:SSF56112InterPro:Ser/Thr_kinase_AS
UniParc:UPI00081ABE83SEG:seg::::
Description
hypothetical protein
Coordinates
chr3:+:47917298..47931039
Molecular Weight (calculated)
51128.1 Da
IEP (calculated)
6.441
GRAVY (calculated)
-0.336
Length
454 amino acids
Sequence
(BLAST)
001: MVGGGGGGGG GALRRVGKYE VGRTIGEGTF AKVKFAQNTE TGESVAMKVL DRSSILKHKM AEQIKREISI MKLVRHPNVV RLHEVLASRK KIFIILEFIT
101: GGELFDKIIR HGRLNEADAR RYFQQLIDGV DFCHKKGVYH RDLKPENLLL DSQGNLKISD FGLSAWPAQG SSLLRTTCGT PNYVAPEVLS HKGYNGALAD
201: TWSCGVILYV LLAGYLPFDE VDLTTLYGKI ESAEYSFPAW FSGGAKSLIR RILDPNPEKR IRIEEIRNDE WFQKNYEPIK EIENEEVNLD DVNAAFDDPE
301: DDTEDAFEDE AGPLTLNAFD LIILSQGLNL AALFDRRQDY DKLQNRFLSR NPAKVILSSM EVVAQSMGFK THIRNYKMRV EGLSADKTSY LSVMVEVFEV
401: APSIFMVELQ RAAGDTSEYN TFVNNYCSKL DDIIWKFPTE KGKSRMPRLS KSHS
Best Arabidopsis Sequence Match ( AT4G24400.1 )
(BLAST)
001: MVVRKVGKYE LGRTIGEGTF AKVKFAQNTE TGESVAMKIV DRSTIIKRKM VDQIKREISI MKLVRHPCVV RLYEVLASRT KIYIILEYIT GGELFDKIVR
101: NGRLSESEAR KYFHQLIDGV DYCHSKGVYH RDLKPENLLL DSQGNLKISD FGLSALPEQG VTILKTTCGT PNYVAPEVLS HKGYNGAVAD IWSCGVILYV
201: LMAGYLPFDE MDLPTLYSKI DKAEFSCPSY FALGAKSLIN RILDPNPETR ITIAEIRKDE WFLKDYTPVQ LIDYEHVNLD DVYAAFDDPE EQTYAQDGTR
301: DTGPLTLNAF DLIILSQGLN LATLFDRGKD SMKHQTRFIS HKPANVVLSS MEVVSQSMGF KTHIRNYKMR VEGLSANKTS HFSVILEVFK VAPSILMVDI
401: QNAAGDAEEY LKFYKTFCSK LDDIIWKPPD ASMRNRVTKA KSKRR
Arabidopsis Description
CIPK8CBL-interacting serine/threonine-protein kinase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9STV4]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.