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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 5
  • nucleus 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:cytosol
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
EER93313
EER93461
EER94470
EER97615
EES00612
KXG34475
KXG40139
OQU77359
OQU79501

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G48260.1 EER94470 AT5G47100.1 14730064
AT1G48260.1 OQU79501 AT5G55990.1 21798944
AT3G17510.1 EER93313 AT3G13460.1 16113215
AT3G17510.1 EER93461 AT3G13460.1 16113215
AT3G17510.1 KXG34475 AT3G13460.1 16113215
AT3G17510.1 KXG40139 AT3G13460.1 16113215
AT3G17510.1 EER97615 AT3G17510.1 10590166
AT3G17510.1 EES00612 AT3G17510.1 10590166
AT3G17510.1 OQU77359 AT3G17510.1 10590166
AT3G17510.1 EER94470 AT5G47100.1 14730064
AT3G17510.1 EER94470 AT5G47100.1 17092313
AT3G17510.1 OQU79501 AT5G55990.1 10590166
AT3G17510.1 OQU79501 AT5G55990.1 11230129
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d006944_P001 Maize cytosol 94.37 87.66
Zm00001d022272_P002 Maize cytosol 93.24 86.79
Os07t0637000-01 Rice cytosol 83.56 83.56
HORVU2Hr1G027080.5 Barley cytosol 83.78 82.48
TraesCS2D01G155700.1 Wheat cytosol 83.33 82.04
TraesCS2B01G175800.2 Wheat cytosol 83.11 81.82
TraesCS2A01G150600.2 Wheat cytosol 83.11 81.82
GSMUA_Achr8P10920_001 Banana cytosol 66.22 67.9
VIT_05s0020g00830.t01 Wine grape cytosol 58.78 66.75
GSMUA_Achr1P25010_001 Banana cytosol 67.57 65.79
GSMUA_Achr11P... Banana cytosol 66.22 65.19
GSMUA_Achr11P... Banana cytosol 62.84 65.03
KRH19498 Soybean cytosol 63.29 63.0
KRH12685 Soybean cytosol 60.59 61.56
GSMUA_AchrUn_... Banana cytosol 65.99 61.55
KRH02470 Soybean cytosol 61.71 61.16
EES00612 Sorghum cytosol 63.51 60.91
KRH37641 Soybean cytosol 61.26 60.71
PGSC0003DMT400069822 Potato cytosol 61.49 59.87
CDX82366 Canola cytosol 59.46 59.59
CDX75921 Canola cytosol 59.46 59.46
Bra001665.1-P Field mustard cytosol 59.01 59.14
Solyc05g053210.2.1 Tomato cytosol 61.26 59.13
OQU77359 Sorghum cytosol, mitochondrion 61.04 58.79
CDX92136 Canola cytosol 58.78 58.52
Solyc12g098910.1.1 Tomato cytosol 61.49 58.46
Bra022219.1-P Field mustard cytosol 58.56 58.3
AT3G17510.1 Thale cress cytosol 57.43 57.43
AT1G48260.1 Thale cress cytosol 55.41 56.94
CDY43284 Canola cytosol 54.28 56.57
CDX93655 Canola cytosol 53.83 56.24
CDY43285 Canola cytosol 53.83 56.24
CDX95849 Canola plasma membrane 59.01 56.1
CDX93653 Canola cytosol 53.38 55.76
Bra014124.1-P Field mustard cytosol 52.03 55.26
CDY41846 Canola cytosol 52.03 55.26
CDY23677 Canola cytosol 49.55 55.14
PGSC0003DMT400011724 Potato cytosol 61.71 51.6
Bra032246.1-P Field mustard cytosol 49.1 48.88
OQU82814 Sorghum cytosol 47.52 47.95
OQU88438 Sorghum cytosol, mitochondrion 45.5 46.87
EER92350 Sorghum cytosol, mitochondrion 46.85 46.33
EES16537 Sorghum cytosol 41.67 45.91
EER92947 Sorghum cytosol, plastid 46.17 45.86
KXG37001 Sorghum cytosol, mitochondrion 45.5 45.09
EER90021 Sorghum cytosol 45.5 44.99
KXG32670 Sorghum cytosol 43.69 42.73
EES01406 Sorghum cytosol 36.04 32.06
EES19859 Sorghum cytosol 35.81 31.55
KXG39612 Sorghum cytosol 34.91 30.21
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:18.4.5.3Gene3D:3.30.200.20Gene3D:3.30.310.80EntrezGene:8063532UniProt:C4P7S5InterPro:Ca/CaM-dep_Ca-dep_prot_Kinase
EnsemblPlants:EER97615ProteinID:EER97615ProteinID:EER97615.1EMBL:FJ901204GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0006464GO:GO:0006468GO:GO:0007154GO:GO:0007165
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016310GO:GO:0016740
GO:GO:0018105GO:GO:0018107GO:GO:0019538GO:GO:0035556InterPro:IPR000719InterPro:IPR018451
InterPro:Kinase-like_dom_sfInterPro:NAF/FISL_domainInterPro:NAF_domPFAM:PF00069PFAM:PF03822PIRSF:PIRSF000654
ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS50816PANTHER:PTHR43895PANTHER:PTHR43895:SF9
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220EnsemblPlantsGene:SORBI_3002G390100SUPFAM:SSF56112unigene:Sbi.21639
unigene:Sbi.4660InterPro:Ser/Thr_kinase_ASUniParc:UPI0001A42018RefSeq:XP_002461094.1SEG:seg:
Description
hypothetical protein
Coordinates
chr2:+:74335213..74340589
Molecular Weight (calculated)
50268.8 Da
IEP (calculated)
8.886
GRAVY (calculated)
-0.351
Length
444 amino acids
Sequence
(BLAST)
001: MRMGKYEMGR TLGEGHFGKV KLARHADTGR TFAIKILDRQ RILAMKINEQ IKREIATLKL LKHPNVVRLY EVSASKTKIY MVLEYVNGGE LFDKIALKGK
101: LTEKEARKLF QQLIDAVAYC HEKGVYHRDL KPENVLVDAK GNIKVSDFGL SALPQNQRKD GLLHTTCGSP NYIAPEVLLN KGYDGSMSDI WSCGAILYVM
201: LTGNLPFDDQ NVVVLYQKIL KGNAHIPKWL SQGAQDILRK ILDPNPITRI DVDGIRAHDW FKQGYAAAVP FNDDEDISID EDSLHMTERN GIQDKIAINQ
301: INAFQLIGMS SCLDLSGFFE KEDASERKIR FASNYSPAYL FEKIESIVRK MGFQVHKSNG KLKVIQDCKG LAKSRGQELL LISAEVFEIN ESLYVVELKK
401: SSGDCSLYRK LCETLSEDLG TRKSQQFLKQ DSIRQEIGRY NSSF
Best Arabidopsis Sequence Match ( AT3G17510.1 )
(BLAST)
001: MVRRQEEEKK AEKGMRLGKY ELGRTLGEGN FGKVKFAKDT VSGHSFAVKI IDKSRIADLN FSLQIKREIR TLKMLKHPHI VRLHEVLASK TKINMVMELV
101: TGGELFDRIV SNGKLTETDG RKMFQQLIDG ISYCHSKGVF HRDLKLENVL LDAKGHIKIT DFGLSALPQH FRDDGLLHTT CGSPNYVAPE VLANRGYDGA
201: ASDIWSCGVI LYVILTGCLP FDDRNLAVLY QKICKGDPPI PRWLSPGART MIKRMLDPNP VTRITVVGIK ASEWFKLEYI PSIPDDDDEE EVDTDDDAFS
301: IQELGSEEGK GSDSPTIINA FQLIGMSSFL DLSGFFEQEN VSERRIRFTS NSSAKDLLEK IETAVTEMGF SVQKKHAKLR VKQEERNQKG QVGLSVTAEV
401: FEIKPSLNVV ELRKSYGDSC LYRQLYERLL KDVGTSSPEQ EIVT
Arabidopsis Description
CIPK1CBL-interacting serine/threonine-protein kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWC9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.