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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX75712
CDX75921
CDX82366
CDX82538
CDX92136
CDX92464
CDX95849
CDY07089
CDY11963
CDY23602
CDY24182
CDY25987
CDY28977
CDY32236
CDY34452
CDY36774
CDY40580
CDY43989
CDY56859
CDY69850

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G17510.1 CDX75712 AT3G13460.1 16113215
AT3G17510.1 CDX82538 AT3G13460.1 16113215
AT3G17510.1 CDY07089 AT3G13460.1 16113215
AT3G17510.1 CDY23602 AT3G13460.1 16113215
AT3G17510.1 CDY24182 AT3G13460.1 16113215
AT3G17510.1 CDY43989 AT3G13460.1 16113215
AT3G17510.1 CDX75921 AT3G17510.1 10590166
AT3G17510.1 CDX82366 AT3G17510.1 10590166
AT3G17510.1 CDX92136 AT3G17510.1 10590166
AT3G17510.1 CDX95849 AT3G17510.1 10590166
AT3G17510.1 CDX92464 AT4G01420.1 11230129
AT3G17510.1 CDY56859 AT4G01420.1 11230129
AT3G17510.1 CDY32236 AT4G16350.1 11230129
AT3G17510.1 CDY34452 AT4G16350.1 11230129
AT3G17510.1 CDY25987 AT5G47100.1 14730064
AT3G17510.1 CDY28977 AT5G47100.1 14730064
AT3G17510.1 CDY40580 AT5G47100.1 14730064
AT3G17510.1 CDY69850 AT5G47100.1 14730064
AT3G17510.1 CDY25987 AT5G47100.1 17092313
AT3G17510.1 CDY28977 AT5G47100.1 17092313
AT3G17510.1 CDY40580 AT5G47100.1 17092313
AT3G17510.1 CDY69850 AT5G47100.1 17092313
AT3G17510.1 CDY11963 AT5G55990.1 10590166
AT3G17510.1 CDY36774 AT5G55990.1 10590166
AT3G17510.1 CDY11963 AT5G55990.1 11230129
AT3G17510.1 CDY36774 AT5G55990.1 11230129
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra001665.1-P Field mustard cytosol 99.1 99.1
CDX75921 Canola cytosol 98.42 98.2
AT3G17510.1 Thale cress cytosol 91.87 91.67
CDX92136 Canola cytosol 90.97 90.36
CDX95849 Canola plasma membrane 90.97 86.3
CDY41846 Canola cytosol 73.14 77.51
CDX93655 Canola cytosol 74.27 77.41
CDY43284 Canola cytosol 74.27 77.23
CDY43285 Canola cytosol 74.04 77.18
CDX93653 Canola cytosol 73.81 76.94
CDY23677 Canola cytosol 68.4 75.94
VIT_05s0020g00830.t01 Wine grape cytosol 62.75 71.1
KRH19498 Soybean cytosol 68.85 68.39
KRH12685 Soybean cytosol 67.04 67.96
KRH37641 Soybean cytosol 68.62 67.86
KRH02470 Soybean cytosol 68.17 67.41
GSMUA_Achr3P13480_001 Banana cytosol 62.98 67.07
PGSC0003DMT400069822 Potato cytosol 68.85 66.89
Solyc05g053210.2.1 Tomato cytosol 68.62 66.09
GSMUA_Achr8P10920_001 Banana cytosol 64.33 65.82
GSMUA_Achr11P... Banana cytosol 63.21 65.27
GSMUA_Achr11P... Banana cytosol 66.37 65.19
Solyc12g098910.1.1 Tomato cytosol 67.49 64.03
GSMUA_Achr1P25010_001 Banana cytosol 65.69 63.82
Os07t0637000-01 Rice cytosol 62.08 61.94
GSMUA_AchrUn_... Banana cytosol 65.69 61.13
EER97615 Sorghum cytosol 59.59 59.46
Os01t0292200-01 Rice cytosol 61.4 59.0
Zm00001d040567_P001 Maize cytosol 61.17 58.91
HORVU2Hr1G027080.5 Barley cytosol 59.82 58.76
TraesCS2A01G150600.2 Wheat cytosol 59.59 58.54
TraesCS2D01G155700.1 Wheat cytosol 59.59 58.54
EES00612 Sorghum cytosol 60.72 58.1
TraesCS2B01G175800.2 Wheat cytosol 59.14 58.09
Os05t0136200-01 Rice cytosol 59.37 57.93
OQU77359 Sorghum cytosol, mitochondrion 59.37 57.05
PGSC0003DMT400011724 Potato cytosol 67.95 56.69
Zm00001d024762_P001 Maize cytosol 58.69 56.16
TraesCS1B01G098700.2 Wheat cytosol 58.92 56.01
Zm00001d022272_P002 Maize cytosol 60.27 55.97
TraesCS1B01G098600.1 Wheat cytosol 58.69 55.79
Zm00001d006944_P001 Maize cytosol 60.05 55.65
TraesCS1D01G082600.1 Wheat cytosol 58.47 55.58
TraesCS1D01G082200.1 Wheat cytosol 58.24 55.48
TraesCS1A01G080500.2 Wheat cytosol 58.47 55.46
TraesCS1A01G080600.1 Wheat cytosol 58.24 55.36
TraesCS1A01G080700.1 Wheat cytosol 57.56 54.14
TraesCS1D01G082500.1 Wheat cytosol 58.47 53.96
HORVU1Hr1G017240.4 Barley cytosol 58.47 52.64
HORVU1Hr1G017380.4 Barley cytosol 58.47 52.32
CDY37992 Canola cytosol 44.02 48.99
CDY48189 Canola cytosol, mitochondrion 48.31 48.64
CDX77058 Canola cytosol, mitochondrion 48.31 48.64
CDY26276 Canola mitochondrion 50.11 47.95
CDY16600 Canola cytosol 47.18 47.5
CDY32442 Canola cytosol 47.63 47.42
CDY09107 Canola cytosol 47.18 47.39
CDX92400 Canola cytosol 47.18 47.39
CDY63182 Canola mitochondrion 49.89 47.32
CDY15197 Canola cytosol 47.63 47.2
CDX90013 Canola cytosol 47.63 47.2
CDX90240 Canola plastid 49.44 45.91
CDX77603 Canola plastid 49.89 45.85
CDX98191 Canola plastid 49.66 45.55
CDY36813 Canola cytosol 46.5 45.47
CDY25896 Canola cytosol 42.66 45.43
CDY44603 Canola cytosol 45.6 44.59
CDY11858 Canola cytosol 42.21 43.69
CDX88633 Canola cytosol 40.41 43.55
CDY68878 Canola cytosol, plastid 43.57 43.27
CDY03449 Canola cytosol 43.57 42.6
CDY49727 Canola cytosol 37.7 42.17
CDY68292 Canola nucleus 19.86 37.93
CDX74283 Canola cytosol 34.54 30.54
CDY49976 Canola cytosol 26.41 30.0
CDY43267 Canola cytosol 34.09 29.84
CDY37545 Canola cytosol 34.09 29.84
CDY55800 Canola cytosol 34.31 29.75
CDY34697 Canola cytosol 34.31 29.75
CDX97762 Canola cytosol 32.96 29.55
CDX74460 Canola cytosol 32.96 29.55
CDY04058 Canola cytosol 33.63 29.33
CDY44405 Canola cytosol 33.86 29.24
CDX85250 Canola cytosol 33.63 29.1
CDX86386 Canola cytosol 33.63 29.04
CDX91963 Canola plasma membrane 34.54 12.34
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:18.4.5.3Gene3D:3.30.310.80GO:A0A078CYV4EnsemblPlants:CDX82366ProteinID:CDX82366ProteinID:CDX82366.1
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524
GO:GO:0006464GO:GO:0006468GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00137487001InterPro:IPR000719
InterPro:IPR018451InterPro:Kinase-like_dom_sfInterPro:NAF/FISL_domainInterPro:NAF_domPFAM:PF00069PFAM:PF03822
PIRSF:PIRSF000654ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS50816PANTHER:PTHR24343
PANTHER:PTHR24343:SF143InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_AS
UniParc:UPI0001B63F2ESEG:seg::::
Description
BnaA03g34550D
Coordinates
chrLK031828:+:862657..866464
Molecular Weight (calculated)
49844.9 Da
IEP (calculated)
6.907
GRAVY (calculated)
-0.383
Length
443 amino acids
Sequence
(BLAST)
001: MVRKHEEEVR KEMRLGKYEL GRTLGEGNFG KVKFAKDTVS GQPFAVKIID KSRISHLNFS LQIKREIRTL KMLKHPNIVR LHEVLASKTK IYMVMECVMG
101: GELFDRIVSK GKLSETEGRK MFQQLIDGIS YCHSKGVFHR DLKLENVLLD ANGHIKITDF GLSALPQHFR DDGLLHTTCG SPNYVAPEVL ANRGYDGAAS
201: DIWSCGVILY VILTGCLPFD DRNLAVLYQK ICKGDPPIPR WLSPGARTMV KRMLDPNPVT RITVTGIKAS EWFKQDYTPS VPDDDDDKEE VDTDDDSFSV
301: QELGSEEGKG SDSPTIINAF QLIGMSSFLD LSGFFEQEDV SERRIRFTSN SSARDLLEKI ETAVTEMGFS VQKKHAKLKV KQEETNHKGQ VGLLVTAEVF
401: EIKPSLNVVE LRKSYGDSSL YRQLYERLLK DVGTSSPEQG LVT
Best Arabidopsis Sequence Match ( AT3G17510.1 )
(BLAST)
001: MVRRQEEEKK AEKGMRLGKY ELGRTLGEGN FGKVKFAKDT VSGHSFAVKI IDKSRIADLN FSLQIKREIR TLKMLKHPHI VRLHEVLASK TKINMVMELV
101: TGGELFDRIV SNGKLTETDG RKMFQQLIDG ISYCHSKGVF HRDLKLENVL LDAKGHIKIT DFGLSALPQH FRDDGLLHTT CGSPNYVAPE VLANRGYDGA
201: ASDIWSCGVI LYVILTGCLP FDDRNLAVLY QKICKGDPPI PRWLSPGART MIKRMLDPNP VTRITVVGIK ASEWFKLEYI PSIPDDDDEE EVDTDDDAFS
301: IQELGSEEGK GSDSPTIINA FQLIGMSSFL DLSGFFEQEN VSERRIRFTS NSSAKDLLEK IETAVTEMGF SVQKKHAKLR VKQEERNQKG QVGLSVTAEV
401: FEIKPSLNVV ELRKSYGDSC LYRQLYERLL KDVGTSSPEQ EIVT
Arabidopsis Description
CIPK1CBL-interacting serine/threonine-protein kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWC9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.