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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
EER93313
EER93461
EER94470
EER97615
EES00612
KXG34475
KXG40139
OQU77359
OQU79501

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G48260.1 EER94470 AT5G47100.1 14730064
AT1G48260.1 OQU79501 AT5G55990.1 21798944
AT3G17510.1 EER93313 AT3G13460.1 16113215
AT3G17510.1 EER93461 AT3G13460.1 16113215
AT3G17510.1 KXG34475 AT3G13460.1 16113215
AT3G17510.1 KXG40139 AT3G13460.1 16113215
AT3G17510.1 EER97615 AT3G17510.1 10590166
AT3G17510.1 EES00612 AT3G17510.1 10590166
AT3G17510.1 OQU77359 AT3G17510.1 10590166
AT3G17510.1 EER94470 AT5G47100.1 14730064
AT3G17510.1 EER94470 AT5G47100.1 17092313
AT3G17510.1 OQU79501 AT5G55990.1 10590166
AT3G17510.1 OQU79501 AT5G55990.1 11230129
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d040567_P001 Maize cytosol 92.44 93.04
Os01t0292200-01 Rice cytosol 86.61 86.98
OQU77359 Sorghum cytosol, mitochondrion 74.08 74.4
GSMUA_Achr8P10920_001 Banana cytosol 66.95 71.59
GSMUA_Achr11P... Banana cytosol 63.93 69.0
GSMUA_Achr11P... Banana cytosol 66.52 68.29
GSMUA_Achr1P25010_001 Banana cytosol 66.95 67.98
VIT_05s0020g00830.t01 Wine grape cytosol 55.29 65.47
GSMUA_AchrUn_... Banana cytosol 66.09 64.29
EER97615 Sorghum cytosol 60.91 63.51
KRH19498 Soybean cytosol 60.04 62.33
KRH37641 Soybean cytosol 60.26 62.28
KRH12685 Soybean cytosol 58.53 62.01
PGSC0003DMT400069822 Potato cytosol 60.48 61.4
Solyc12g098910.1.1 Tomato cytosol 61.34 60.81
CDX82366 Canola cytosol 58.1 60.72
Bra001665.1-P Field mustard cytosol 57.88 60.5
KRH02470 Soybean cytosol 58.53 60.49
Solyc05g053210.2.1 Tomato cytosol 60.04 60.43
CDX75921 Canola cytosol 57.88 60.36
AT1G48260.1 Thale cress cytosol 55.51 59.49
CDX93655 Canola cytosol 54.43 59.29
CDX93653 Canola cytosol 54.43 59.29
CDY43285 Canola cytosol 54.21 59.06
CDY43284 Canola cytosol 54.21 58.92
AT3G17510.1 Thale cress cytosol 56.37 58.78
Bra022219.1-P Field mustard cytosol 56.59 58.74
CDX92136 Canola cytosol 56.59 58.74
CDY23677 Canola cytosol 50.11 58.15
CDY41846 Canola cytosol 52.05 57.66
Bra014124.1-P Field mustard cytosol 52.05 57.66
CDX95849 Canola plasma membrane 56.8 56.32
PGSC0003DMT400011724 Potato cytosol 61.56 53.67
Bra032246.1-P Field mustard cytosol 49.24 51.12
OQU82814 Sorghum cytosol 47.08 49.55
OQU88438 Sorghum cytosol, mitochondrion 43.84 47.1
EES16537 Sorghum cytosol 40.82 46.9
EER90021 Sorghum cytosol 45.14 46.55
EER92947 Sorghum cytosol, plastid 44.49 46.09
KXG32670 Sorghum cytosol 45.14 46.04
KXG37001 Sorghum cytosol, mitochondrion 44.49 45.98
EER92350 Sorghum cytosol, mitochondrion 44.49 45.88
EES19859 Sorghum cytosol 36.93 33.93
EES01406 Sorghum cytosol 35.85 33.27
KXG39612 Sorghum cytosol 34.13 30.8
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:18.4.5.3Gene3D:3.30.200.20Gene3D:3.30.310.80EntrezGene:8060301UniProt:C4P7T1EnsemblPlants:EES00612
ProteinID:EES00612ProteinID:EES00612.1EMBL:FJ901210GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0006464GO:GO:0006468GO:GO:0007154
GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016310
GO:GO:0016740GO:GO:0018105GO:GO:0018107GO:GO:0019538GO:GO:0035556InterPro:IPR000719
InterPro:IPR018451InterPro:Kinase-like_dom_sfInterPro:NAF/FISL_domainInterPro:NAF_domPFAM:PF00069PFAM:PF03822
PIRSF:PIRSF000654ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS50816PANTHER:PTHR24343
PANTHER:PTHR24343:SF224InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220EnsemblPlantsGene:SORBI_3003G139500SUPFAM:SSF56112
unigene:Sbi.11136unigene:Sbi.21634InterPro:Ser/Thr_kinase_ASUniParc:UPI0001A42023RefSeq:XP_002455492.1SEG:seg
Description
hypothetical protein
Coordinates
chr3:+:13562263..13567086
Molecular Weight (calculated)
51918.5 Da
IEP (calculated)
7.012
GRAVY (calculated)
-0.306
Length
463 amino acids
Sequence
(BLAST)
001: MVNGEPAGAE CTRASLLGRY EIGRTLGEGN FGKVKYARHI GTGGHFAIKI LDRSKILSLR IDDQIRREIG TLKLLKHPNV VRLHEVAASK TKIYMVLEFV
101: NGGELFDKIA IKGKLSEHEG RRLFQQLIDG VSYCHDKGVY HRDLKPENVL VDRKGNIKIS DFGLSALPQH LGNDGLLHTT CGSPNYIAPE VLQNRGYDGS
201: LSDIWSCGVI LYVMLVGYLP FDDRNLVVLY QKIFKGDCQI PKWLSPAAQD LLKRILEPNP MKRINITGIR EHEWFKKDYV PAVPYDDDED VLSGSVLSIK
301: EQIEEPAQEK CTHINAFQLI GMASSLDLSG LFEEEDAAQR KIRFTSTHPP KDLFDKIESV AMEMGFEVHR GASKLKVLKN SKCSKKSRNP SSFLVCTEVF
401: ELGPSLYVVE LRKSHGDSTL YRQLCERLSD ELGACKTEQI MRTESLSDDL SSLDGEAFPL SGF
Best Arabidopsis Sequence Match ( AT3G17510.1 )
(BLAST)
001: MVRRQEEEKK AEKGMRLGKY ELGRTLGEGN FGKVKFAKDT VSGHSFAVKI IDKSRIADLN FSLQIKREIR TLKMLKHPHI VRLHEVLASK TKINMVMELV
101: TGGELFDRIV SNGKLTETDG RKMFQQLIDG ISYCHSKGVF HRDLKLENVL LDAKGHIKIT DFGLSALPQH FRDDGLLHTT CGSPNYVAPE VLANRGYDGA
201: ASDIWSCGVI LYVILTGCLP FDDRNLAVLY QKICKGDPPI PRWLSPGART MIKRMLDPNP VTRITVVGIK ASEWFKLEYI PSIPDDDDEE EVDTDDDAFS
301: IQELGSEEGK GSDSPTIINA FQLIGMSSFL DLSGFFEQEN VSERRIRFTS NSSAKDLLEK IETAVTEMGF SVQKKHAKLR VKQEERNQKG QVGLSVTAEV
401: FEIKPSLNVV ELRKSYGDSC LYRQLYERLL KDVGTSSPEQ EIVT
Arabidopsis Description
CIPK1CBL-interacting serine/threonine-protein kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWC9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.