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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Solyc01g028860.2.1
Solyc05g053210.2.1
Solyc06g060980.1.1
Solyc07g065820.2.1
Solyc08g007160.2.1
Solyc08g077770.2.1
Solyc12g015870.1.1
Solyc12g098910.1.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G48260.1 Solyc06g060980.1.1 AT5G47100.1 14730064
AT1G48260.1 Solyc08g007160.2.1 AT5G47100.1 14730064
AT1G48260.1 Solyc08g077770.2.1 AT5G47100.1 14730064
AT1G48260.1 Solyc07g065820.2.1 AT5G55990.1 21798944
AT1G48260.1 Solyc12g015870.1.1 AT5G55990.1 21798944
AT3G17510.1 Solyc01g028860.2.1 AT3G13460.1 16113215
AT3G17510.1 Solyc05g053210.2.1 AT3G17510.1 10590166
AT3G17510.1 Solyc12g098910.1.1 AT3G17510.1 10590166
AT3G17510.1 Solyc06g060980.1.1 AT5G47100.1 14730064
AT3G17510.1 Solyc08g007160.2.1 AT5G47100.1 14730064
AT3G17510.1 Solyc08g077770.2.1 AT5G47100.1 14730064
AT3G17510.1 Solyc06g060980.1.1 AT5G47100.1 17092313
AT3G17510.1 Solyc08g007160.2.1 AT5G47100.1 17092313
AT3G17510.1 Solyc08g077770.2.1 AT5G47100.1 17092313
AT3G17510.1 Solyc07g065820.2.1 AT5G55990.1 10590166
AT3G17510.1 Solyc12g015870.1.1 AT5G55990.1 10590166
AT3G17510.1 Solyc07g065820.2.1 AT5G55990.1 11230129
AT3G17510.1 Solyc12g015870.1.1 AT5G55990.1 11230129
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400011724 Potato cytosol 97.22 85.5
Solyc05g053210.2.1 Tomato cytosol 76.02 77.17
VIT_05s0020g00830.t01 Wine grape cytosol 62.74 74.94
KRH19498 Soybean cytosol 69.38 72.65
KRH02470 Soybean cytosol 68.95 71.88
KRH12685 Soybean cytosol 65.74 70.25
GSMUA_Achr3P13480_001 Banana cytosol 61.67 69.23
KRH37641 Soybean cytosol 65.95 68.75
AT1G48260.1 Thale cress cytosol 63.38 68.52
CDX75921 Canola cytosol 64.24 67.57
Bra001665.1-P Field mustard cytosol 64.03 67.49
CDX82366 Canola cytosol 64.03 67.49
AT3G17510.1 Thale cress cytosol 64.03 67.34
GSMUA_Achr8P10920_001 Banana cytosol 62.31 67.21
CDX92136 Canola cytosol 64.03 67.04
Bra022219.1-P Field mustard cytosol 63.81 66.82
CDY43284 Canola cytosol 60.6 66.43
CDY43285 Canola cytosol 59.96 65.88
CDX93655 Canola cytosol 59.96 65.88
CDX93653 Canola cytosol 59.53 65.41
GSMUA_Achr11P... Banana cytosol 59.96 65.27
GSMUA_Achr1P25010_001 Banana cytosol 63.6 65.13
CDY23677 Canola cytosol 54.82 64.16
CDY41846 Canola cytosol 57.39 64.11
Bra014124.1-P Field mustard cytosol 57.39 64.11
CDX95849 Canola plasma membrane 64.03 64.03
GSMUA_Achr11P... Banana cytosol 61.46 63.64
Os07t0637000-01 Rice cytosol 60.39 63.51
Os01t0292200-01 Rice cytosol 61.88 62.69
EER97615 Sorghum cytosol 58.46 61.49
TraesCS2D01G155700.1 Wheat cytosol 59.31 61.42
EES00612 Sorghum cytosol 60.81 61.34
Zm00001d040567_P001 Maize cytosol 60.39 61.3
TraesCS2B01G175800.2 Wheat cytosol 58.89 60.98
TraesCS2A01G150600.2 Wheat cytosol 58.89 60.98
HORVU2Hr1G027080.5 Barley cytosol 58.89 60.98
GSMUA_AchrUn_... Banana cytosol 61.24 60.08
Os05t0136200-01 Rice cytosol 58.03 59.69
OQU77359 Sorghum cytosol, mitochondrion 58.46 59.22
Zm00001d006944_P001 Maize cytosol 59.74 58.37
TraesCS1B01G098600.1 Wheat cytosol 57.82 57.94
TraesCS1A01G080500.2 Wheat cytosol 57.82 57.82
Zm00001d024762_P001 Maize cytosol 57.17 57.67
TraesCS1D01G082600.1 Wheat cytosol 57.39 57.51
Zm00001d022272_P002 Maize cytosol 58.67 57.44
TraesCS1D01G082200.1 Wheat cytosol 57.17 57.42
Bra032246.1-P Field mustard cytosol 54.82 57.4
TraesCS1A01G080600.1 Wheat cytosol 57.17 57.3
TraesCS1B01G098700.2 Wheat cytosol 57.17 57.3
TraesCS1A01G080700.1 Wheat cytosol 57.17 56.69
TraesCS1D01G082500.1 Wheat cytosol 57.82 56.25
HORVU1Hr1G017240.4 Barley cytosol 57.82 54.88
HORVU1Hr1G017380.4 Barley cytosol 57.82 54.55
Solyc11g062410.1.1 Tomato plastid 47.11 50.34
Solyc01g008850.2.1 Tomato plastid 47.11 50.23
Solyc02g021440.2.1 Tomato cytosol 47.54 48.58
Solyc05g047600.2.1 Tomato cytosol 45.82 47.45
Solyc04g076810.2.1 Tomato cytosol 43.9 45.86
Solyc12g009570.1.1 Tomato cytosol 42.83 44.84
Solyc03g115700.2.1 Tomato cytosol, nucleus 32.98 30.56
Solyc02g067030.2.1 Tomato cytosol, nucleus 33.62 30.54
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:18.4.5.3Gene3D:3.30.200.20Gene3D:3.30.310.80GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0006464GO:GO:0006468GO:GO:0007154
GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016310
GO:GO:0016740GO:GO:0019538GO:GO:0035556InterPro:IPR000719InterPro:IPR001772InterPro:IPR018451
UniProt:K4DHR4InterPro:KA1_domInterPro:Kinase-like_dom_sfInterPro:NAF/FISL_domainInterPro:NAF_domPFAM:PF00069
PFAM:PF02149PFAM:PF03822PIRSF:PIRSF000654ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011
PFscan:PS50032PFscan:PS50816PANTHER:PTHR24343PANTHER:PTHR24343:SF143InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BS
SMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASEnsemblPlantsGene:Solyc12g098910.1EnsemblPlants:Solyc12g098910.1.1UniParc:UPI000276A524
SEG:seg:::::
Description
Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:K4DHR4]
Coordinates
chr12:+:66271440..66278050
Molecular Weight (calculated)
52830.3 Da
IEP (calculated)
6.614
GRAVY (calculated)
-0.439
Length
467 amino acids
Sequence
(BLAST)
001: MVLIQHQQQQ QEEEIVRRER GKKGMRVGKY ELGRTLGEGN FGKVKFAKHT DSAKSFAIKI LEKNRIQDLR ITDQIKREIR TLKVLKHPNV VRLYEVLASK
101: TKIYMVLEYV NGGELFDRIA TKGKLSETLG RKLFQQLIDG VSYCHDKGVF HRDLKLENVL IDGGRNIKIT DFGLSALPQH LRDDGLLHTT CGSPNYVAPE
201: VLSNRGYNGA TSDTWSCGVI LYVILTGFLP FDDRNLAVLY QKIFKGDAPI PKWLSQGAKN LIKRILDPNP QTRITMAEIK EDEWFKQNYT PTNPDEEEVE
301: SDDTSSDDEV LTIHEAPLDI ERNPESPSVI NNAFQLIGMS SCLDLSGFFE NEDVSERKIR FTSNLSPKEL LDRIENLAVQ MGFQVQKKPG KLKVLLENKG
401: QKTQASLSIV VEVFEISTSL YVVELQKSSG DSAVYRQLCN KLSDELGVQQ SEELLTNLIV KDGNHTS
Best Arabidopsis Sequence Match ( AT3G17510.1 )
(BLAST)
001: MVRRQEEEKK AEKGMRLGKY ELGRTLGEGN FGKVKFAKDT VSGHSFAVKI IDKSRIADLN FSLQIKREIR TLKMLKHPHI VRLHEVLASK TKINMVMELV
101: TGGELFDRIV SNGKLTETDG RKMFQQLIDG ISYCHSKGVF HRDLKLENVL LDAKGHIKIT DFGLSALPQH FRDDGLLHTT CGSPNYVAPE VLANRGYDGA
201: ASDIWSCGVI LYVILTGCLP FDDRNLAVLY QKICKGDPPI PRWLSPGART MIKRMLDPNP VTRITVVGIK ASEWFKLEYI PSIPDDDDEE EVDTDDDAFS
301: IQELGSEEGK GSDSPTIINA FQLIGMSSFL DLSGFFEQEN VSERRIRFTS NSSAKDLLEK IETAVTEMGF SVQKKHAKLR VKQEERNQKG QVGLSVTAEV
401: FEIKPSLNVV ELRKSYGDSC LYRQLYERLL KDVGTSSPEQ EIVT
Arabidopsis Description
CIPK1CBL-interacting serine/threonine-protein kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWC9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.