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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus, cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
 nucleus: 28394025
msms PMID: 28394025 doi
AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400063153 Potato cytosol 97.62 97.62
TraesCS1B01G364800.1 Wheat cytosol 67.66 68.2
TraesCS1D01G353300.1 Wheat cytosol 67.66 68.2
Solyc02g067030.2.1 Tomato cytosol, nucleus 69.44 68.09
EES19859 Sorghum cytosol 68.06 68.06
TraesCS1A01G350500.1 Wheat cytosol 67.66 67.79
EES01406 Sorghum cytosol 67.06 67.74
Os05t0530500-02 Rice cytosol, plasma membrane 67.86 67.72
Zm00001d005108_P003 Maize cytosol 67.06 67.2
HORVU1Hr1G081310.4 Barley cytosol 67.66 65.58
TraesCS3D01G282800.1 Wheat cytosol 64.68 64.81
TraesCS3B01G316500.1 Wheat cytosol 64.68 64.81
TraesCS3A01G282800.1 Wheat cytosol 64.68 64.81
HORVU3Hr1G069190.1 Barley cytosol, plastid 65.28 57.62
Zm00001d010811_P002 Maize cytosol 60.91 41.43
Solyc05g047600.2.1 Tomato cytosol 31.94 35.7
Zm00001d038745_P002 Maize cytosol 58.93 35.4
Solyc11g062410.1.1 Tomato plastid 30.36 35.01
Solyc01g008850.2.1 Tomato plastid 30.16 34.7
Solyc02g021440.2.1 Tomato cytosol 31.35 34.57
Solyc04g076810.2.1 Tomato cytosol 29.76 33.56
Solyc05g053210.2.1 Tomato cytosol 30.36 33.26
Solyc12g098910.1.1 Tomato cytosol 30.56 32.98
Solyc12g009570.1.1 Tomato cytosol 28.77 32.51
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:18.4.5.1.1MapMan:27.3.1.1Gene3D:3.30.310.80EMBL:AY222455GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0006464GO:GO:0006468
GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301
GO:GO:0016310GO:GO:0016740GO:GO:0019538GO:GO:0035556InterPro:IPR000719InterPro:IPR001772
InterPro:IPR015940InterPro:KA1/Ssp2_CInterPro:KA1_domInterPro:Kinase-like_dom_sfPFAM:PF00069PFAM:PF02149
PIRSF:PIRSF000615ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS50030PFscan:PS50032
PANTHER:PTHR24343PANTHER:PTHR24343:SF156InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSUniProt:Q6XNM3SMART:SM00165
SMART:SM00220SUPFAM:SSF103243SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASEnsemblPlantsGene:Solyc03g115700.2EnsemblPlants:Solyc03g115700.2.1
InterPro:UBAUniParc:UPI000022FAEB::::
Description
Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:Q6XNM3]
Coordinates
chr3:+:65340738..65344796
Molecular Weight (calculated)
57766.1 Da
IEP (calculated)
8.368
GRAVY (calculated)
-0.321
Length
504 amino acids
Sequence
(BLAST)
001: MSSRGGGIAE SPYLRNYRVG KTLGHGSFGK VKIAEHLLTG HKVAIKILNR RKMKTPDMEE KLRREIKICR LFVHPHVIRL YEVIETPTDI YVVMEYVKSG
101: ELFDYIVEKG RLQEDEARKF FQQIIAGVEY CHRNMVVHRD LKPENLLLDA RRNVKIADFG LGNIMRDGHF LKTSCGSPNY AAPEVVSGKL YAGPEVDVWS
201: CGVILYALLC GTLPFDDENI PNLFKKIKSG VYTLPSHLSP LARDLIPRML IVDPMKRISV ADIRQHQWFK IHLPRYLAVP PPDARQHLKK LDEEILQQVT
301: RMGLDRDQLL DSLQKRIQDD ATVAYYLLYD NRSMASSGYL GAEFQESVDG YSSGLFPNLD LQLSSGNGVS EESLRRPFRK EKTWLVGLQS PANPKEIMNQ
401: VLGTLLELNV RWKKIGHYNM KCLWCHDLHL HSMASNHMND DDHFISNATA ISTHLQPLPT VKFEMQLYKT EDEKYLLDLQ RISGPQFLFL DFCAGFIRQL
501: EGPQ
Best Arabidopsis Sequence Match ( AT3G01090.2 )
(BLAST)
001: MFKRVDEFNL VSSTIDHRIF KSRMDGSGTG SRSGVESILP NYKLGRTLGI GSFGRVKIAE HALTGHKVAI KILNRRKIKN MEMEEKVRRE IKILRLFMHP
101: HIIRLYEVIE TPTDIYLVME YVNSGELFDY IVEKGRLQED EARNFFQQII SGVEYCHRNM VVHRDLKPEN LLLDSKCNVK IADFGLSNIM RDGHFLKTSC
201: GSPNYAAPEV ISGKLYAGPE VDVWSCGVIL YALLCGTLPF DDENIPNLFK KIKGGIYTLP SHLSPGARDL IPRMLVVDPM KRVTIPEIRQ HPWFQAHLPR
301: YLAVPPPDTV QQAKKIDEEI LQEVINMGFD RNHLIESLRN RTQNDGTVTY YLILDNRFRA SSGYLGAEFQ ETMEGTPRMH PAESVASPVS HRLPGLMEYQ
401: GVGLRSQYPV ERKWALGLQS RAHPREIMTE VLKALQDLNV CWKKIGHYNM KCRWVPNSSA DGMLSNSMHD NNYFGDESSI IENEAAVKSP NVVKFEIQLY
501: KTRDDKYLLD LQRVQGPQFL FLDLCAAFLA QLRVL
Arabidopsis Description
KIN10SNF1-related protein kinase catalytic subunit alpha KIN10 [Source:UniProtKB/Swiss-Prot;Acc:Q38997]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.