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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • plastid 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Solyc01g008950.2.1
Solyc02g082100.2.1
Solyc03g005240.1.1
Solyc03g097790.2.1
Solyc03g110960.2.1
Solyc05g008830.2.1
Solyc06g053930.2.1
Solyc06g060980.1.1
Solyc06g063330.2.1
Solyc06g071960.2.1
Solyc07g040990.2.1
Solyc07g065820.2.1
Solyc08g007160.2.1
Solyc08g008210.2.1
Solyc08g065330.2.1
Solyc08g077770.2.1
Solyc08g081910.2.1
Solyc10g005220.2.1
Solyc10g077010.1.1
Solyc10g081170.1.1
Solyc11g072240.1.1
Solyc12g009570.1.1
Solyc12g015870.1.1
Solyc12g055800.1.1
Solyc12g056110.1.1
Solyc12g099990.1.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G35410.1 Solyc03g097790.2.1 AT1G12840.1 17875927
AT5G35410.1 Solyc02g082100.2.1 AT1G30860.1 21798944
AT5G35410.1 Solyc10g005220.2.1 AT1G30860.1 21798944
AT5G35410.1 Solyc06g063330.2.1 AT1G78900.1 17875927
AT5G35410.1 Solyc12g055800.1.1 AT1G78900.1 17875927
AT5G35410.1 Solyc05g008830.2.1 AT2G01190.1 21798944
AT5G35410.1 Solyc01g008950.2.1 AT2G41090.1 17360592
AT5G35410.1 Solyc10g077010.1.1 AT2G41090.1 17360592
AT5G35410.1 Solyc10g081170.1.1 AT2G41090.1 17360592
AT5G35410.1 Solyc11g072240.1.1 AT2G41090.1 17360592
AT5G35410.1 Solyc12g099990.1.1 AT2G41090.1 17360592
AT5G35410.1 Solyc01g008950.2.1 AT2G41100.1 17360592
AT5G35410.1 Solyc10g077010.1.1 AT2G41100.1 17360592
AT5G35410.1 Solyc10g081170.1.1 AT2G41100.1 17360592
AT5G35410.1 Solyc11g072240.1.1 AT2G41100.1 17360592
AT5G35410.1 Solyc12g099990.1.1 AT2G41100.1 17360592
AT5G35410.1 Solyc08g008210.2.1 AT4G11150.1 17875927
AT5G35410.1 Solyc08g081910.2.1 AT4G11150.1 17875927
AT5G35410.1 Solyc12g056110.1.1 AT4G11150.1 17875927
AT5G35410.1 Solyc03g005240.1.1 AT4G14640.1 17360592
AT5G35410.1 Solyc06g053930.2.1 AT4G14640.1 17360592
AT5G35410.1 Solyc08g065330.2.1 AT4G33000.1 17449811
AT5G35410.1 Solyc08g065330.2.1 AT4G33000.1 17825054
AT5G35410.1 Solyc08g065330.2.1 AT4G33000.1 19448033
AT5G35410.1 Solyc01g008950.2.1 AT5G21274.1 17360592
AT5G35410.1 Solyc10g077010.1.1 AT5G21274.1 17360592
AT5G35410.1 Solyc10g081170.1.1 AT5G21274.1 17360592
AT5G35410.1 Solyc11g072240.1.1 AT5G21274.1 17360592
AT5G35410.1 Solyc12g099990.1.1 AT5G21274.1 17360592
AT5G35410.1 Solyc12g009570.1.1 AT5G35410.1 11402167
AT5G35410.1 Solyc06g060980.1.1 AT5G47100.1 14730064
AT5G35410.1 Solyc08g007160.2.1 AT5G47100.1 14730064
AT5G35410.1 Solyc08g077770.2.1 AT5G47100.1 14730064
AT5G35410.1 Solyc07g065820.2.1 AT5G55990.1 11402167
AT5G35410.1 Solyc12g015870.1.1 AT5G55990.1 11402167
AT5G35410.1 Solyc07g040990.2.1 AT5G57050.1 14504388
AT5G35410.1 Solyc03g110960.2.1 AT5G63310.1 17785451
AT5G35410.1 Solyc06g071960.2.1 AT5G63310.1 17785451
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400007475 Potato cytosol 97.53 97.53
VIT_11s0016g05420.t01 Wine grape cytosol 79.82 79.82
KRH03685 Soybean cytosol 76.91 76.91
KRH20252 Soybean cytosol 74.89 74.89
AT5G35410.1 Thale cress cytosol 71.75 71.75
CDY44603 Canola cytosol 72.65 71.52
Bra025613.1-P Field mustard cytosol 72.2 71.08
CDY36813 Canola cytosol 72.2 71.08
EER90021 Sorghum cytosol 69.96 69.49
Os06t0606000-01 Rice cytosol 69.96 68.87
Zm00001d036879_P001 Maize cytosol, mitochondrion 69.28 68.82
TraesCS7B01G279300.1 Wheat mitochondrion 67.71 67.71
Zm00001d000407_P001 Maize plastid 68.61 67.7
TraesCS7D01G374400.2 Wheat mitochondrion 67.26 67.26
TraesCS7A01G377600.1 Wheat mitochondrion 67.04 67.04
GSMUA_Achr10P... Banana cytosol 70.63 66.18
Solyc04g076810.2.1 Tomato cytosol 65.25 65.1
Solyc11g062410.1.1 Tomato plastid 60.99 62.24
Solyc01g008850.2.1 Tomato plastid 60.31 61.42
HORVU7Hr1G090260.14 Barley cytosol 68.83 60.79
Solyc02g021440.2.1 Tomato cytosol 57.17 55.8
Solyc05g047600.2.1 Tomato cytosol 54.26 53.66
Solyc05g053210.2.1 Tomato cytosol 45.74 44.35
Solyc12g098910.1.1 Tomato cytosol 44.84 42.83
Solyc03g115700.2.1 Tomato cytosol, nucleus 32.51 28.77
Solyc02g067030.2.1 Tomato cytosol, nucleus 32.29 28.02
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:18.4.5.3MapMan:26.6.1.1.2Gene3D:3.30.200.20Gene3D:3.30.310.80EMBL:AJ717348EMBL:EF467279
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005737
GO:GO:0005773GO:GO:0006464GO:GO:0006468GO:GO:0006950GO:GO:0007154GO:GO:0007165
GO:GO:0008150GO:GO:0008152GO:GO:0009628GO:GO:0009651GO:GO:0009705GO:GO:0009987
GO:GO:0016020GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538GO:GO:0035556
InterPro:IPR000719InterPro:IPR018451InterPro:Kinase-like_dom_sfInterPro:NAF/FISL_domainInterPro:NAF_domPFAM:PF00069
PFAM:PF03822PIRSF:PIRSF000654ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS50816
PANTHER:PTHR24343PANTHER:PTHR24343:SF157InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSUniProt:Q4W3B3SMART:SM00220
SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASEnsemblPlantsGene:Solyc12g009570.1EnsemblPlants:Solyc12g009570.1.1UniParc:UPI000051AEDE:
Description
Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:Q4W3B3]
Coordinates
chr12:-:2827273..2833740
Molecular Weight (calculated)
50493.1 Da
IEP (calculated)
9.012
GRAVY (calculated)
-0.206
Length
446 amino acids
Sequence
(BLAST)
001: MKKVKRKLGK YEVGRTIGEG TFAKVKFARN TETGENVAIK VLAKSTILKH RMVEQIKREI SIMKIVRHPC IVRLHEVLAS QTKIYIVQEF VTGGELFDKI
101: VHLGRLSEDE ARRYFQELID AIAHCHSKGV YHRDLKPENL LLDFQGNLKI SDFGLSALPQ QGVELLYTTC GTPNYVAPEV LGNRGYDGAA ADVWSCGIIL
201: YVLMAGYLPF DETDLPTLYT KIKAAEFSCP FWFSPGATSL IQKIIDPNPQ TRIKIDGIKR DPWFRKNYRA VKAKADEVVN LDDIHAVFDD IEDAFVSEKS
301: EDSESGPLVM NAFEMITLSQ GLNLSALFDR RQDYVKRQTR FISRQPAKVV IETIEAAAES LGLKVHTRDY KTRIEGVTAN RAGQFAVVLE VFQVAPSLFM
401: VDVRKAAGDT LEYHKFYKTF CTKIDDVIWK PKEGMSNAVL LRTRTR
Best Arabidopsis Sequence Match ( AT5G35410.1 )
(BLAST)
001: MTKKMRRVGK YEVGRTIGEG TFAKVKFARN TDTGDNVAIK IMAKSTILKN RMVDQIKREI SIMKIVRHPN IVRLYEVLAS PSKIYIVLEF VTGGELFDRI
101: VHKGRLEESE SRKYFQQLVD AVAHCHCKGV YHRDLKPENL LLDTNGNLKV SDFGLSALPQ EGVELLRTTC GTPNYVAPEV LSGQGYDGSA ADIWSCGVIL
201: FVILAGYLPF SETDLPGLYR KINAAEFSCP PWFSAEVKFL IHRILDPNPK TRIQIQGIKK DPWFRLNYVP IRAREEEEVN LDDIRAVFDG IEGSYVAENV
301: ERNDEGPLMM NAFEMITLSQ GLNLSALFDR RQDFVKRQTR FVSRREPSEI IANIEAVANS MGFKSHTRNF KTRLEGLSSI KAGQLAVVIE IYEVAPSLFM
401: VDVRKAAGET LEYHKFYKKL CSKLENIIWR ATEGIPKSEI LRTITF
Arabidopsis Description
CIPK24Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:A0A178UB05]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.