Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- endoplasmic reticulum 3
- plasma membrane 3
- extracellular 3
- vacuole 2
- golgi 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc02g069370.2.1 | |
| Solyc11g008430.1.1 | |
| Solyc12g009570.1.1 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400076980 | Potato | mitochondrion | 87.55 | 77.59 |
| CDY04300 | Canola | cytosol | 38.91 | 76.34 |
| Bra011404.1-P | Field mustard | cytosol, plastid | 61.87 | 75.36 |
| CDX75314 | Canola | cytosol, endoplasmic reticulum | 69.65 | 71.89 |
| CDX68929 | Canola | cytosol, endoplasmic reticulum, mitochondrion | 69.26 | 71.49 |
| VIT_04s0008g00950.t01 | Wine grape | cytosol, endoplasmic reticulum, mitochondrion, plastid | 71.6 | 71.32 |
| Bra034543.1-P | Field mustard | cytosol | 65.76 | 68.7 |
| CDY28278 | Canola | cytosol | 65.76 | 68.7 |
| CDY45024 | Canola | cytosol | 65.76 | 68.7 |
| CDY13513 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 56.03 | 66.36 |
| AT4G33000.1 | Thale cress | golgi, plastid | 65.76 | 66.02 |
| Bra037030.1-P | Field mustard | cytosol | 64.59 | 64.34 |
| CDX72384 | Canola | cytosol | 66.54 | 64.04 |
| VIT_04s0008g00960.t01 | Wine grape | plastid | 61.87 | 63.35 |
| Solyc03g083320.2.1 | Tomato | cytosol | 52.53 | 63.08 |
| Solyc06g051970.2.1 | Tomato | cytosol | 51.75 | 62.15 |
| GSMUA_Achr3P32370_001 | Banana | cytosol | 63.81 | 62.12 |
| Solyc07g065820.2.1 | Tomato | cytosol | 52.14 | 61.19 |
| KRH44162 | Soybean | cytosol, extracellular | 62.65 | 60.75 |
| Os01t0711500-00 | Rice | plastid | 62.65 | 60.53 |
| TraesCS3A01G053300.1 | Wheat | golgi | 67.32 | 59.25 |
| TraesCS3D01G211300.1 | Wheat | cytosol | 66.15 | 59.03 |
| Solyc12g015870.1.1 | Tomato | cytosol | 51.36 | 58.93 |
| KRH05482 | Soybean | cytosol, plasma membrane, plastid | 59.14 | 58.91 |
| TraesCS3B01G235500.1 | Wheat | cytosol | 65.37 | 58.33 |
| KRH47134 | Soybean | cytosol | 59.53 | 58.17 |
| Solyc08g077770.2.1 | Tomato | cytosol | 47.86 | 57.75 |
| Solyc06g060980.1.1 | Tomato | cytosol, mitochondrion | 47.86 | 57.21 |
| TraesCS3B01G064500.2 | Wheat | cytosol, golgi, mitochondrion | 65.76 | 57.09 |
| KXG33232 | Sorghum | endoplasmic reticulum | 61.87 | 56.18 |
| Solyc08g007160.2.1 | Tomato | cytosol | 46.69 | 55.81 |
| Solyc12g055920.1.1 | Tomato | cytosol, mitochondrion | 48.64 | 55.31 |
| KXG32770 | Sorghum | cytosol, plastid | 67.7 | 54.55 |
| Solyc02g032310.1.1 | Tomato | cytosol | 44.36 | 52.05 |
| Solyc08g036590.1.1 | Tomato | endoplasmic reticulum, extracellular | 46.3 | 51.97 |
| Solyc08g054570.1.1 | Tomato | cytosol | 35.8 | 49.46 |
| Zm00001d044285_P003 | Maize | plastid | 67.7 | 48.2 |
| TraesCS3A01G208300.2 | Wheat | cytosol, mitochondrion | 66.15 | 46.83 |
| Os01t0579600-01 | Rice | cytosol | 38.91 | 45.87 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:26.6.1.1.3 | EMBL:AB675689 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom |
| UniProt:G4XMX1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0009628 | GO:GO:0009705 | GO:GO:0016020 | GO:GO:0042538 | GO:GO:0043266 |
| GO:GO:0050801 | GO:GO:2000021 | InterPro:IPR002048 | EMBL:JF831199 | PFAM:PF13499 | PFAM:PF13833 |
| PRINTS:PR00450 | ScanProsite:PS00018 | PFscan:PS50222 | PANTHER:PTHR23056 | PANTHER:PTHR23056:SF26 | SMART:SM00054 |
| SUPFAM:SSF47473 | EnsemblPlantsGene:Solyc08g065330.2 | EnsemblPlants:Solyc08g065330.2.1 | UniParc:UPI00022BDB53 | SEG:seg | : |
Description
Calcineurin B-like protein 10 [Source:Projected from Arabidopsis thaliana (AT4G33000) UniProtKB/Swiss-Prot;Acc:Q7FRS8]
Coordinates
chr8:+:53237567..53246655
Molecular Weight (calculated)
29878.6 Da
IEP (calculated)
4.391
GRAVY (calculated)
-0.151
Length
257 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSTRNSLSW SSLTISEKIC ASFFPIIALI EACMYAVSGC FECHYPPNKK FSYEYTDLAR LAGESRFNVN EVEALYELFK KLSCSIIDDG LIHKEELQLA
101: LFQTPHGENL FLDRVFDLFD EKQNGVIEFE EFIHALNIFH PYAPIDDKID FAFRLYDLRQ TGYIEREEVK QMVIAILMES EMRLSDELVE EIIDKTFADA
201: DADGDGKIDK KDWKEFAIRY PSLLKNMTLP YLKDITTSFP SFVFHTQVED IEKIHLL
101: LFQTPHGENL FLDRVFDLFD EKQNGVIEFE EFIHALNIFH PYAPIDDKID FAFRLYDLRQ TGYIEREEVK QMVIAILMES EMRLSDELVE EIIDKTFADA
201: DADGDGKIDK KDWKEFAIRY PSLLKNMTLP YLKDITTSFP SFVFHTQVED IEKIHLL
001: MTTGRPNNIL ALKISTRSSS LTVGEQFCAV FIPFFAIIDV LVSSVGQCFD CRSTSPRTCQ HADLERLARE SQFSVNEVEA LYELFKKLSC SIIDDGLIHK
101: EELRLALFQA PYGENLFLDR VFDLFDEKKN GVIEFEEFIH ALSVFHPYAS IQEKTDFAFR LYDLRQTGFI EREEVQQMVS AILLESDMML SDELLTMIID
201: KTFADADSDK DGKISKDEWN VYVHKHPSLL KNMTLPYLKD VTTAFPSFIF NTEVED
101: EELRLALFQA PYGENLFLDR VFDLFDEKKN GVIEFEEFIH ALSVFHPYAS IQEKTDFAFR LYDLRQTGFI EREEVQQMVS AILLESDMML SDELLTMIID
201: KTFADADSDK DGKISKDEWN VYVHKHPSLL KNMTLPYLKD VTTAFPSFIF NTEVED
Arabidopsis Description
CBL10Calcineurin B-like 10 [Source:UniProtKB/TrEMBL;Acc:M5BEI3]
SUBAcon: [golgi,plastid]
SUBAcon: [golgi,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.