Factsheet for Zm00001d044285_P003

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 1
endoplasmic reticulum 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d000407_P001
Zm00001d013583_P001
Zm00001d031179_P001
Zm00001d034949_P001
Zm00001d036879_P001
Zm00001d048410_P004

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G33000.1	Zm00001d048410_P004	AT3G54840.1	17825054
AT4G33000.1	Zm00001d013583_P001	AT4G19640.1	17825054
AT4G33000.1	Zm00001d031179_P001	AT4G19640.1	17825054
AT4G33000.1	Zm00001d034949_P001	AT4G19640.1	17825054
AT4G33000.1	Zm00001d000407_P001	AT5G35410.1	17449811
AT4G33000.1	Zm00001d036879_P001	AT5G35410.1	17449811
AT4G33000.1	Zm00001d000407_P001	AT5G35410.1	17825054
AT4G33000.1	Zm00001d036879_P001	AT5G35410.1	17825054
AT4G33000.1	Zm00001d000407_P001	AT5G35410.1	19448033
AT4G33000.1	Zm00001d036879_P001	AT5G35410.1	19448033

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG32770	Sorghum	cytosol, plastid	77.01	87.15
TraesCS3D01G211300.1	Wheat	cytosol	60.94	76.39
TraesCS3B01G235500.1	Wheat	cytosol	60.66	76.04
Bra011404.1-P	Field mustard	cytosol, plastid	43.49	74.41
TraesCS3B01G064500.2	Wheat	cytosol, golgi, mitochondrion	60.94	74.32
TraesCS3A01G053300.1	Wheat	golgi	60.11	74.32
CDY04300	Canola	cytosol	26.87	74.05
VIT_04s0008g00950.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plastid	51.52	72.09
CDX75314	Canola	cytosol, endoplasmic reticulum	47.65	69.08
CDX68929	Canola	cytosol, endoplasmic reticulum, mitochondrion	47.65	69.08
Os01t0579600-01	Rice	cytosol	41.0	67.89
CDY45024	Canola	cytosol	46.26	67.89
Bra034543.1-P	Field mustard	cytosol	46.26	67.89
Solyc08g065330.2.1	Tomato	endoplasmic reticulum, extracellular	48.2	67.7
CDY28278	Canola	cytosol	45.98	67.48
VIT_04s0008g00960.t01	Wine grape	plastid	46.81	67.33
CDY13513	Canola	endoplasmic reticulum, nucleus, plasma membrane	39.34	65.44
AT4G33000.1	Thale cress	golgi, plastid	45.71	64.45
GSMUA_Achr3P32370_001	Banana	cytosol	47.09	64.39
Bra037030.1-P	Field mustard	cytosol	45.98	64.34
TraesCS3A01G208300.2	Wheat	cytosol, mitochondrion	63.99	63.64
CDX72384	Canola	cytosol	46.26	62.55
Zm00001d023506_P001	Maize	cytosol	37.95	61.44
Zm00001d023504_P001	Maize	cytosol	37.95	61.44
Zm00001d053293_P001	Maize	cytosol	32.96	61.34
KRH44162	Soybean	cytosol, extracellular	44.32	60.38
Zm00001d030955_P003	Maize	cytosol	36.84	59.11
Zm00001d033295_P001	Maize	cytosol	36.57	58.67
KRH47134	Soybean	cytosol	42.66	58.56
Zm00001d029976_P004	Maize	cytosol, mitochondrion	33.8	57.28
KRH05482	Soybean	cytosol, plasma membrane, plastid	40.44	56.59
PGSC0003DMT400076980	Potato	mitochondrion	45.15	56.21
Zm00001d041392_P001	Maize	cytosol, extracellular	26.04	54.97
Zm00001d041921_P001	Maize	cytosol	11.91	52.44
Zm00001d010931_P001	Maize	cytosol	12.19	52.38
Zm00001d044389_P001	Maize	cytosol	31.86	48.73
Zm00001d000046_P001	Maize	cytosol	22.71	46.59
Zm00001d041393_P001	Maize	extracellular	13.57	45.37
Zm00001d038730_P001	Maize	cytosol	34.35	39.87

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	UniProt:A0A1D6NKC2	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0005886	GO:GO:0006810	GO:GO:0006950	GO:GO:0008150
GO:GO:0009628	GO:GO:0009705	GO:GO:0016020	GO:GO:0042538	GO:GO:0043266	GO:GO:0050801
GO:GO:2000021	InterPro:IPR002048	ProteinID:ONM40700.1	PFAM:PF13202	ScanProsite:PS00018	PFscan:PS50222
PANTHER:PTHR23056	PANTHER:PTHR23056:SF26	SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI000844EA2B	EnsemblPlantsGene:Zm00001d044285
EnsemblPlants:Zm00001d044285_P003	EnsemblPlants:Zm00001d044285_T003	SEG:seg	:	:	:

Description

calcineurin B-like10 calcineurin B-like10

Coordinates

chr3:+:224212852..224216726

Molecular Weight (calculated)

40645.4 Da

IEP (calculated)

5.047

GRAVY (calculated)

-0.081

Length

361 amino acids

Sequence
(BLAST)

001: MPRATEAASQ FTPGPGRPVA MNSRSSSGGV RSESSLSLGE RLCAVFFPVI AIAEAVFFAF TDCLADLCTD SGSSHSRRFG AGASSSAARN SRSNHCQPHH
101: RPFLRRATAG GWTSPNLRQL ARLADESRCF SVNEVEALFE LYKKISCSII DDGLIHKEEL QLALFKTPSG ENLFLDRVFY LFDEKKNGVI EFDEFIHSLS
201: VFHPLAPIED KIDSCISYVS VAFRLYDLRQ TGFIEREEVK QMVIAILMES DLKLSDDLLE AIIDKVGNNQ LECPQDFFFF FVGAVLMFLY SISQTFEDAD
301: ADKDGKINKE EWKEFALRHP NLLKNMTLPY LRFTPDLLIF MKSRDITTVF PSFVFNTAVE D

Best Arabidopsis Sequence Match ( AT4G26570.1 )
(BLAST)

001: MSQCIDGFKH VCSSFFRCFD IDIYKQSGGL GDPELLARET VFSVSEIEAL YELFKKISSA VIDDGLINKE EFQLALFKTN KKESLFADRV FDLFDTKHNG
101: ILGFEEFARA LSVFHPNAPI EDKIDFSFQL YDLKQQGFIE RQEVKQMVVA TLAESGMNLS DEIIESIIDK TFEEADTKHD GRIDKEEWRT LVLRHPSLLK
201: NMTLQYLKDI TTTFPSFVFH SQVEDT

Arabidopsis Description

ATCBL3calcineurin B-like 3 [Source:TAIR;Acc:AT4G26570]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.