Factsheet for TraesCS3B01G235500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
ChloroP:	plastid
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G140700.1
TraesCS1B01G157100.1
TraesCS1D01G139500.1
TraesCS4A01G035800.1
TraesCS4A01G294600.1
TraesCS4B01G019100.2
TraesCS4B01G268600.1
TraesCS4D01G017300.1
TraesCS4D01G267900.1
TraesCS5B01G014400.1
TraesCS5D01G022200.2
TraesCS7A01G377600.1
TraesCS7B01G279300.1
TraesCS7D01G374400.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G33000.1	TraesCS1A01G140700.1	AT3G54840.1	17825054
AT4G33000.1	TraesCS1B01G157100.1	AT3G54840.1	17825054
AT4G33000.1	TraesCS1D01G139500.1	AT3G54840.1	17825054
AT4G33000.1	TraesCS4A01G035800.1	AT3G54840.1	17825054
AT4G33000.1	TraesCS4B01G268600.1	AT3G54840.1	17825054
AT4G33000.1	TraesCS4D01G267900.1	AT3G54840.1	17825054
AT4G33000.1	TraesCS4A01G294600.1	AT4G19640.1	17825054
AT4G33000.1	TraesCS4B01G019100.2	AT4G19640.1	17825054
AT4G33000.1	TraesCS4D01G017300.1	AT4G19640.1	17825054
AT4G33000.1	TraesCS5B01G014400.1	AT4G19640.1	17825054
AT4G33000.1	TraesCS5D01G022200.2	AT4G19640.1	17825054
AT4G33000.1	TraesCS7A01G377600.1	AT5G35410.1	17449811
AT4G33000.1	TraesCS7B01G279300.1	AT5G35410.1	17449811
AT4G33000.1	TraesCS7D01G374400.2	AT5G35410.1	17449811
AT4G33000.1	TraesCS7A01G377600.1	AT5G35410.1	17825054
AT4G33000.1	TraesCS7B01G279300.1	AT5G35410.1	17825054
AT4G33000.1	TraesCS7D01G374400.2	AT5G35410.1	17825054
AT4G33000.1	TraesCS7A01G377600.1	AT5G35410.1	19448033
AT4G33000.1	TraesCS7B01G279300.1	AT5G35410.1	19448033
AT4G33000.1	TraesCS7D01G374400.2	AT5G35410.1	19448033

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G211300.1	Wheat	cytosol	97.57	97.57
TraesCS3B01G064500.2	Wheat	cytosol, golgi, mitochondrion	84.38	82.09
TraesCS3A01G208300.2	Wheat	cytosol, mitochondrion	97.92	77.69
Bra011404.1-P	Field mustard	cytosol, plastid	52.08	71.09
KXG32770	Sorghum	cytosol, plastid	78.12	70.53
CDY04300	Canola	cytosol	31.25	68.7
Os01t0579600-01	Rice	cytosol	51.74	68.35
VIT_04s0008g00950.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plastid	60.76	67.83
Bra034543.1-P	Field mustard	cytosol	57.64	67.48
CDY45024	Canola	cytosol	57.64	67.48
CDX68929	Canola	cytosol, endoplasmic reticulum, mitochondrion	58.33	67.47
CDX75314	Canola	cytosol, endoplasmic reticulum	58.33	67.47
CDY28278	Canola	cytosol	57.29	67.07
CDY13513	Canola	endoplasmic reticulum, nucleus, plasma membrane	49.65	65.9
Solyc08g065330.2.1	Tomato	endoplasmic reticulum, extracellular	58.33	65.37
AT4G33000.1	Thale cress	golgi, plastid	56.6	63.67
GSMUA_Achr3P32370_001	Banana	cytosol	58.33	63.64
Bra037030.1-P	Field mustard	cytosol	56.6	63.18
VIT_04s0008g00960.t01	Wine grape	plastid	54.51	62.55
CDX72384	Canola	cytosol	57.29	61.8
TraesCS5B01G124300.1	Wheat	cytosol	47.92	61.06
Zm00001d044285_P003	Maize	plastid	76.04	60.66
KRH44162	Soybean	cytosol, extracellular	55.21	60.0
TraesCS5B01G071500.1	Wheat	cytosol	46.18	59.11
KRH47134	Soybean	cytosol	53.82	58.94
TraesCS1B01G229300.1	Wheat	cytosol	43.75	58.6
TraesCS4B01G379200.1	Wheat	cytosol	40.97	58.13
KRH05482	Soybean	cytosol, plasma membrane, plastid	51.39	57.36
TraesCS1B01G272000.1	Wheat	cytosol	43.75	56.25
TraesCS1B01G370500.1	Wheat	cytosol	42.71	55.41
TraesCS1B01G370900.1	Wheat	mitochondrion	41.32	54.59
TraesCS1B01G357200.1	Wheat	cytosol	40.62	54.42
PGSC0003DMT400076980	Potato	mitochondrion	54.51	54.14
TraesCS1B01G370800.1	Wheat	cytosol	41.32	53.6
TraesCS1B01G370600.1	Wheat	nucleus	25.35	49.66
TraesCS4B01G069900.1	Wheat	cytosol	42.71	47.31

Protein Annotations

EnsemblPlants:TraesCS3B01G235500.1	EnsemblPlantsGene:TraesCS3B01G235500	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR23056	PANTHER:PTHR23056:SF26
PFAM:PF13499	PFAM:PF13833	PFscan:PS50222	PRINTS:PR00450	ScanProsite:PS00018	SEG:seg
SMART:SM00054	SUPFAM:SSF47473	TIGR:cd00051	MapMan:26.6.1.1.3	:	:

Description

No Description!

Coordinates

chr3B:-:368539168..368546919

Molecular Weight (calculated)

32668.9 Da

IEP (calculated)

4.767

GRAVY (calculated)

-0.109

Length

288 amino acids

Sequence
(BLAST)

001: MDSRFSSGSG DVRSGSSLTV GERLCAAFLP FVAVAEAVFF VLTDCLADIC PPSSSSSRLR RESSASSFLT AKKKSHHLFR RRVGPGCISL DFHNLARLAE
101: ESRCFSVNEV EALFELYKKI SCSIIDDGLI HKEELQLALF KTPSGQNLFI DRVFDLFDEK KNGVIEFDEF IHTLSVFHPC SAVEDKINFA FKLYDLRQTG
201: FIEREEVMQM VIAILNESDM KLSDELLEAI IDKTFEDADT DRDGKISQEE WKEFVLRHPN LLKNMTLPYL RDITTSFPSF VFNTAVED

Best Arabidopsis Sequence Match ( AT4G33000.1 )
(BLAST)

001: MTTGRPNNIL ALKISTRSSS LTVGEQFCAV FIPFFAIIDV LVSSVGQCFD CRSTSPRTCQ HADLERLARE SQFSVNEVEA LYELFKKLSC SIIDDGLIHK
101: EELRLALFQA PYGENLFLDR VFDLFDEKKN GVIEFEEFIH ALSVFHPYAS IQEKTDFAFR LYDLRQTGFI EREEVQQMVS AILLESDMML SDELLTMIID
201: KTFADADSDK DGKISKDEWN VYVHKHPSLL KNMTLPYLKD VTTAFPSFIF NTEVED

Arabidopsis Description

CBL10Calcineurin B-like 10 [Source:UniProtKB/TrEMBL;Acc:M5BEI3]
SUBAcon: [golgi,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.