Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, endoplasmic reticulum, plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- endoplasmic reticulum 2
- plasma membrane 2
- extracellular 1
- vacuole 1
- golgi 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_04s0079g00760.t01 | |
| VIT_11s0016g05420.t01 | |
| VIT_13s0019g04680.t01 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_04s0008g00960.t01 | Wine grape | plastid | 76.36 | 78.49 |
| Bra011404.1-P | Field mustard | cytosol, plastid | 60.85 | 74.41 |
| CDY04300 | Canola | cytosol | 37.21 | 73.28 |
| Solyc08g065330.2.1 | Tomato | endoplasmic reticulum, extracellular | 71.32 | 71.6 |
| Bra034543.1-P | Field mustard | cytosol | 67.05 | 70.33 |
| CDY45024 | Canola | cytosol | 67.05 | 70.33 |
| CDY28278 | Canola | cytosol | 67.05 | 70.33 |
| CDX75314 | Canola | cytosol, endoplasmic reticulum | 67.83 | 70.28 |
| CDX68929 | Canola | cytosol, endoplasmic reticulum, mitochondrion | 67.44 | 69.88 |
| VIT_00s1569g00020.t01 | Wine grape | cytosol | 49.61 | 69.57 |
| AT4G33000.1 | Thale cress | golgi, plastid | 68.22 | 68.75 |
| CDY13513 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 56.98 | 67.74 |
| Bra037030.1-P | Field mustard | cytosol | 66.28 | 66.28 |
| VIT_16s0098g01870.t01 | Wine grape | cytosol | 53.88 | 65.26 |
| GSMUA_Achr3P32370_001 | Banana | cytosol | 66.67 | 65.15 |
| CDX72384 | Canola | cytosol | 66.67 | 64.42 |
| Os01t0711500-00 | Rice | plastid | 65.12 | 63.16 |
| TraesCS3D01G211300.1 | Wheat | cytosol | 68.6 | 61.46 |
| VIT_02s0236g00140.t01 | Wine grape | cytosol | 50.39 | 61.03 |
| TraesCS3B01G235500.1 | Wheat | cytosol | 67.83 | 60.76 |
| VIT_02s0025g01640.t01 | Wine grape | cytosol | 51.55 | 60.73 |
| VIT_19s0015g01070.t01 | Wine grape | extracellular | 53.1 | 60.62 |
| TraesCS3A01G053300.1 | Wheat | golgi | 67.83 | 59.93 |
| PGSC0003DMT400076980 | Potato | mitochondrion | 67.05 | 59.66 |
| TraesCS3B01G064500.2 | Wheat | cytosol, golgi, mitochondrion | 67.05 | 58.45 |
| KXG32770 | Sorghum | cytosol, plastid | 72.09 | 58.31 |
| KXG33232 | Sorghum | endoplasmic reticulum | 63.57 | 57.95 |
| VIT_02s0236g00150.t01 | Wine grape | cytosol | 50.0 | 57.85 |
| Zm00001d044285_P003 | Maize | plastid | 72.09 | 51.52 |
| TraesCS3A01G208300.2 | Wheat | cytosol, mitochondrion | 69.77 | 49.59 |
| VIT_02s0025g01630.t01 | Wine grape | cytosol | 47.67 | 46.77 |
| Os01t0579600-01 | Rice | cytosol | 38.76 | 45.87 |
| VIT_00s0194g00040.t01 | Wine grape | cytosol | 12.4 | 7.9 |
Protein Annotations
| Gene3D:1.10.238.10 | EntrezGene:100259377 | wikigene:100259377 | MapMan:26.6.1.1.3 | ProteinID:ACQ83560 | ProteinID:ACQ83560.1 |
| ProteinID:CBI20635 | ProteinID:CBI20635.3 | EntrezGene:CBL06 | wikigene:CBL06 | UniProt:D7STN6 | InterPro:EF-hand-dom_pair |
| InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | EMBL:FJ901272 | EMBL:FN595231 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR002048 |
| PFAM:PF13499 | PFAM:PF13833 | PRINTS:PR00450 | ScanProsite:PS00018 | PFscan:PS50222 | PANTHER:PTHR23056 |
| PANTHER:PTHR23056:SF26 | SMART:SM00054 | SUPFAM:SSF47473 | TIGR:TC53895 | TMHMM:TMhelix | UniParc:UPI0001BE1AED |
| ArrayExpress:VIT_04s0008g00950 | EnsemblPlantsGene:VIT_04s0008g00950 | EnsemblPlants:VIT_04s0008g00950.t01 | unigene:Vvi.4259 | RefSeq:XP_002277878 | RefSeq:XP_002277878.1 |
| RefSeq:XP_003631807 | RefSeq:XP_003631807.1 | : | : | : | : |
Description
No Description!
Coordinates
chr4:+:833320..838806
Molecular Weight (calculated)
29814.5 Da
IEP (calculated)
4.792
GRAVY (calculated)
-0.166
Length
258 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSWQGTANS TYNYLRSSSL TIGEKLCAAF IPFIGIIEAL VFAVAGCCDF HKNKHHKKLR YGFRELSQLA RESQFTVNEV EALYELFKKL SSSIIDDGLI
101: HKEELQLALF KSPHSENLFL DRVFYLFDEK KNGVIEFDEF VHALNVFHPY APTEDKIDFA FRLYDLRQTG FIEREEVKQM VIAILLESDM NLSDDLLEAI
201: IDKTFADADA DNDGKINKEE WKAFVLRHPN LLKNMTLPYL KDITTVFPSF VFNTEVEE
101: HKEELQLALF KSPHSENLFL DRVFYLFDEK KNGVIEFDEF VHALNVFHPY APTEDKIDFA FRLYDLRQTG FIEREEVKQM VIAILLESDM NLSDDLLEAI
201: IDKTFADADA DNDGKINKEE WKAFVLRHPN LLKNMTLPYL KDITTVFPSF VFNTEVEE
001: MEQVSSRSSS LTVGEQFCAV FIPFFAIIDV LVSSVGQCFD CRSTSPRTCQ HADLERLARE SQFSVNEVEA LYELFKKLSC SIIDDGLIHK EELRLALFQA
101: PYGENLFLDR VFDLFDEKKN GVIEFEEFIH ALSVFHPYAS IQEKTDFAFR LYDLRQTGFI EREEVQQMVS AILLESDMML SDELLTMIID KTFADADSDK
201: DGKISKDEWN VYVHKHPSLL KNMTLPYLKD VTTAFPSFIF NTEVED
101: PYGENLFLDR VFDLFDEKKN GVIEFEEFIH ALSVFHPYAS IQEKTDFAFR LYDLRQTGFI EREEVQQMVS AILLESDMML SDELLTMIID KTFADADSDK
201: DGKISKDEWN VYVHKHPSLL KNMTLPYLKD VTTAFPSFIF NTEVED
Arabidopsis Description
CBL10Calcineurin B-like 10 [Source:UniProtKB/TrEMBL;Acc:M5BEI3]
SUBAcon: [endoplasmic reticulum,plastid]
SUBAcon: [endoplasmic reticulum,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.