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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • cytosol 2
  • nucleus 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
VIT_03s0038g01440.t01
VIT_04s0008g05770.t01
VIT_05s0020g00830.t01
VIT_05s0020g04570.t01
VIT_06s0004g07830.t01
VIT_06s0004g07870.t01
VIT_08s0058g01090.t01
VIT_10s0003g01420.t01
VIT_10s0003g04020.t01
VIT_11s0016g00200.t01
VIT_11s0016g05420.t01
VIT_11s0052g01700.t01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G55990.1 VIT_10s0003g04020.t01 AT1G30270.1 16814720
AT5G55990.1 VIT_10s0003g04020.t01 AT1G30270.1 17898163
AT5G55990.1 VIT_04s0008g05770.t01 AT2G25090.1 17898163
AT5G55990.1 VIT_06s0004g07870.t01 AT2G30360.1 11230129
AT5G55990.1 VIT_06s0004g07870.t01 AT2G30360.1 11402167
AT5G55990.1 VIT_06s0004g07870.t01 AT2G30360.1 17483306
AT5G55990.1 VIT_06s0004g07870.t01 AT2G30360.1 21798944
AT5G55990.1 VIT_05s0020g00830.t01 AT3G17510.1 10590166
AT5G55990.1 VIT_05s0020g00830.t01 AT3G17510.1 11230129
AT5G55990.1 VIT_05s0020g04570.t01 AT3G23000.1 11230129
AT5G55990.1 VIT_05s0020g04570.t01 AT3G23000.1 14730130
AT5G55990.1 VIT_05s0020g04570.t01 AT4G14580.1 11230129
AT5G55990.1 VIT_10s0003g01420.t01 AT4G18700.1 11230129
AT5G55990.1 VIT_10s0003g01420.t01 AT4G18700.1 14730130
AT5G55990.1 VIT_11s0016g00200.t01 AT4G30960.1 11230129
AT5G55990.1 VIT_11s0016g00200.t01 AT4G30960.1 17898163
AT5G55990.1 VIT_03s0038g01440.t01 AT4G38800.1 21798944
AT5G55990.1 VIT_08s0058g01090.t01 AT5G01820.1 11230129
AT5G55990.1 VIT_08s0058g01090.t01 AT5G01820.1 11577192
AT5G55990.1 VIT_08s0058g01090.t01 AT5G01820.1 14730130
AT5G55990.1 VIT_08s0058g01090.t01 AT5G01820.1 21798944
AT5G55990.1 VIT_06s0004g07830.t01 AT5G07070.1 11230129
AT5G55990.1 VIT_11s0016g05420.t01 AT5G35410.1 11402167
AT5G55990.1 VIT_11s0052g01700.t01 AT5G57630.1 21798944
AT5G55990.1 VIT_06s0004g07830.t01 AT5G58380.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY67196 Canola cytosol 8.89 51.43
Zm00001d041393_P001 Maize extracellular 10.12 37.96
VIT_00s1569g00020.t01 Wine grape cytosol 10.62 23.37
VIT_19s0015g01070.t01 Wine grape extracellular 10.62 19.03
Bra026421.1-P Field mustard cytosol 10.12 18.81
Os03t0626800-01 Rice cytosol 10.37 18.67
TraesCS4D01G068700.1 Wheat cytosol 10.37 18.67
TraesCS4A01G245500.1 Wheat cytosol 10.37 18.67
Os12t0597000-01 Rice plasma membrane, vacuole 10.37 18.67
AT5G55990.1 Thale cress cytosol, extracellular 10.37 18.58
CDY06547 Canola cytosol 10.37 18.58
Bra035598.1-P Field mustard cytosol 10.37 18.58
CDY64981 Canola cytosol 10.37 18.58
GSMUA_Achr9P12840_001 Banana cytosol 10.37 18.58
KRH46425 Soybean endoplasmic reticulum 10.37 18.58
KRG98442 Soybean cytosol 10.37 18.58
Solyc07g065820.2.1 Tomato cytosol 9.88 18.26
PGSC0003DMT400057342 Potato cytosol, extracellular 9.88 18.26
HORVU5Hr1G016320.1 Barley cytosol 10.12 18.22
TraesCS5A01G060600.1 Wheat cytosol 10.12 18.22
OQU79501 Sorghum cytosol 10.12 18.22
TraesCS5B01G071500.1 Wheat cytosol 10.12 18.22
TraesCS5D01G072100.1 Wheat cytosol 10.12 18.22
CDX92814 Canola cytosol 10.12 18.14
CDY42728 Canola cytosol 10.12 18.14
CDX94315 Canola cytosol 10.12 18.14
CDX89324 Canola cytosol 10.12 18.14
AT4G26570.2 Thale cress cytosol 10.12 17.83
CDY11963 Canola cytosol 10.37 17.65
PGSC0003DMT400076653 Potato cytosol 9.63 17.41
Solyc12g015870.1.1 Tomato cytosol 9.63 17.41
HORVU4Hr1G011670.1 Barley vacuole 9.63 17.33
CDY36774 Canola cytosol 10.12 17.23
PGSC0003DMT400037245 Potato cytosol 9.38 17.12
VIT_02s0236g00140.t01 Wine grape cytosol 7.9 15.02
VIT_16s0098g01870.t01 Wine grape cytosol 7.65 14.55
VIT_02s0236g00150.t01 Wine grape cytosol 7.9 14.35
VIT_02s0025g01640.t01 Wine grape cytosol 6.91 12.79
VIT_04s0008g00950.t01 Wine grape cytosol, endoplasmic reticulum, mitochondrion, plastid 7.9 12.4
CDX89325 Canola plastid 8.15 12.0
CDX94316 Canola plastid 8.15 11.96
VIT_04s0008g00960.t01 Wine grape plastid 7.41 11.95
Bra028949.1-P Field mustard cytosol 6.17 11.36
VIT_02s0025g01630.t01 Wine grape cytosol 6.91 10.65
TraesCS4B01G069900.1 Wheat cytosol 6.42 10.0
Bra026422.1-P Field mustard cytosol, plastid 4.94 8.0
Protein Annotations
ArrayExpress:VIT_00s0194g00040EnsemblPlants:VIT_00s0194g00040.t01EnsemblPlantsGene:VIT_00s0194g00040Gene3D:1.10.238.10ncoils:CoilPANTHER:PTHR23056
PANTHER:PTHR23056:SF51SEG:segUniParc:UPI0001BE2CA4MapMan:35.1::
Description
No Description!
Coordinates
chrUn:-:10553765..10556235
Molecular Weight (calculated)
7025.6 Da
IEP (calculated)
9.106
GRAVY (calculated)
-0.018
Length
405 amino acids
Sequence
(BLAST)
001: MLRSIKHMLP FAIYNSDLQX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
101: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
201: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
301: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXEWRSL VLRHPSLLKN MTLQYLKDIT TTFPSFVFHS
401: QVDDT
Best Arabidopsis Sequence Match ( AT5G55990.1 )
(BLAST)
001: MSQCVDGIKH LCTSVLGCFD LDLYKQSGGL GDPELLARDT VFSVSEIEAL YELFKKISSA VIDDGLINKE EFQLALFKTN KKESLFADRV FDLFDTKHNG
101: ILGFEEFARA LSVFHPNAPI DDKIHFSFQL YDLKQQGFIE RQEVKQMVVA TLAESGMNLK DTVIEDIIDK TFEEADTKHD GKIDKEEWRS LVLRHPSLLK
201: NMTLQYLKDI TTTFPSFVFH SQVEDT
Arabidopsis Description
CBL2Calcineurin B-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LAS7]
SUBAcon: [extracellular,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.