Factsheet for VIT_03s0038g01440.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plasma membrane, peroxisome

Predictor Summary:

cytosol 2
peroxisome 1
plastid 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0112200-01	Rice	cytosol	72.83	74.52
KRH60729	Soybean	nucleus	73.58	73.58
KRH51422	Soybean	nucleus	72.83	72.56
EES15308	Sorghum	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	68.68	72.51
TraesCS7A01G032500.1	Wheat	cytosol, peroxisome, plastid	64.53	72.15
TraesCS7D01G029100.1	Wheat	cytosol	70.57	71.1
PGSC0003DMT400004137	Potato	cytosol	72.08	71.0
TraesCS4A01G457100.1	Wheat	cytosol, peroxisome, plastid	64.53	70.95
TraesCS3B01G479600.1	Wheat	cytosol	60.75	69.7
TraesCS1B01G060900.1	Wheat	cytosol	69.43	68.4
Zm00001d049823_P001	Maize	extracellular	63.77	67.33
AT4G38800.1	Thale cress	peroxisome	66.79	66.29
AT4G34840.1	Thale cress	cytosol	63.4	66.14
Bra010725.1-P	Field mustard	peroxisome	66.04	66.04
Bra034660.1-P	Field mustard	peroxisome	66.04	65.79
Bra034657.1-P	Field mustard	peroxisome	66.04	65.79
CDY58815	Canola	peroxisome	65.28	65.04
CDY17489	Canola	cytoskeleton, cytosol, peroxisome	64.53	64.29
CDX90294	Canola	peroxisome	66.04	64.1
CDY12103	Canola	peroxisome	66.04	63.87
Solyc01g111060.2.1	Tomato	plastid	72.08	62.01
HORVU7Hr1G004350.5	Barley	cytosol, peroxisome	70.57	59.74
TraesCS3D01G437600.1	Wheat	mitochondrion, plastid	59.25	59.47
Zm00001d031621_P003	Maize	cytosol, extracellular, peroxisome, plastid	67.55	56.83
GSMUA_AchrUn_...	Banana	golgi, vacuole	72.08	54.11
KRH51427	Soybean	mitochondrion	55.47	53.07
KRH60733	Soybean	peroxisome, plasma membrane, plastid	40.0	50.48
CDX72738	Canola	plastid	29.81	46.2

Protein Annotations

EntrezGene:100233110	wikigene:100233110	Gene3D:3.40.50.1580	MapMan:4.1.2.2.6.4.1	EMBL:AJ237993	ProteinID:CAB85633
ProteinID:CAB85633.1	ProteinID:CBI37940	ProteinID:CBI37940.3	UniProt:D7U5C1	EMBL:FN596508	GO:GO:0003674
GO:GO:0003824	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009116	GO:GO:0009987
EntrezGene:GRIP58	wikigene:GRIP58	InterPro:Nucleoside_phosphorylase_d	InterPro:Nucleoside_phosphorylase_sf	PFAM:PF01048	PANTHER:PTHR21234
PANTHER:PTHR21234:SF34	SUPFAM:SSF53167	TIGR:TC53885	UniParc:UPI00015C8CD0	ArrayExpress:VIT_03s0038g01440	EnsemblPlantsGene:VIT_03s0038g01440
EnsemblPlants:VIT_03s0038g01440.t01	unigene:Vvi.6093	RefSeq:XP_010645049.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr3:+:996232..1004637

Molecular Weight (calculated)

28278.1 Da

IEP (calculated)

4.512

GRAVY (calculated)

0.265

Length

265 amino acids

Sequence
(BLAST)

001: MAPHDDRSDV AEEAMVAEAE KRPIATIVII IAMQTEALPL VNRFQLTEDL DSVFPRGVPW VRYHGIYKDL HISIIWPGKD LVLGVDNVGT VSASLVTYAS
101: IQALQPDLVI NAGTAGGFKA KGACVGDVVL ATDVAFHDRR IPIPVFDQYG IGLRKACSAP NLLKELNLKI GALSTGDSLD MSPHDESSIL ANGATVKDME
201: GAAVAYVADL LKVPVIFIKA VTDIVDGEKP TAEEFLQNLA AVTAALDQSV TKVVDFINGK CISEL

Best Arabidopsis Sequence Match ( AT4G34840.1 )
(BLAST)

001: MEGVMGQVEK RPISTIVFIV AMQKEAQPLI NRLRLVEEVN TPFPKEVTWI MFKGMYKDLN INIVCPGKDS TLGVESVGTV PASLVTYASI LAIQPDLIIN
101: AGTAGGFKAK GACISDVYVV STVAFHDRRI PVPVLDIYGV GMRNTFPTPN LIKELNLKVG RLSTGDSMDM SPHDEESITA NDATVKDMEG AAVAYVADIF
201: KVPTILIKGV TDIVDGNRPT SEEFLENLAA VTAKLDESLT KVIDFISGKC LSDL

Arabidopsis Description

MTN25'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q7XA67]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.