Factsheet for TraesCS1B01G060900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome, secretory
MultiLoc:	peroxisome
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G029100.1	Wheat	cytosol	92.94	95.06
TraesCS7A01G032500.1	Wheat	cytosol, peroxisome, plastid	82.9	94.09
TraesCS4A01G457100.1	Wheat	cytosol, peroxisome, plastid	78.81	87.97
Os06t0112200-01	Rice	cytosol	81.04	84.17
EES15308	Sorghum	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	77.32	82.87
HORVU7Hr1G004350.5	Barley	cytosol, peroxisome	94.42	81.15
TraesCS3B01G479600.1	Wheat	cytosol	69.52	80.95
Zm00001d049823_P001	Maize	extracellular	72.86	78.09
VIT_03s0038g01440.t01	Wine grape	cytosol, peroxisome, plasma membrane	68.4	69.43
KRH51422	Soybean	nucleus	68.03	68.8
KRH60729	Soybean	nucleus	67.29	68.3
PGSC0003DMT400004137	Potato	cytosol	67.66	67.66
Zm00001d031621_P003	Maize	cytosol, extracellular, peroxisome, plastid	75.09	64.13
AT4G34840.1	Thale cress	cytosol	58.74	62.2
AT4G38800.1	Thale cress	peroxisome	60.22	60.67
Solyc01g111060.2.1	Tomato	plastid	68.77	60.06
Bra034660.1-P	Field mustard	peroxisome	59.11	59.77
Bra034657.1-P	Field mustard	peroxisome	59.11	59.77
CDY58815	Canola	peroxisome	58.74	59.4
Bra010725.1-P	Field mustard	peroxisome	58.36	59.25
CDY17489	Canola	cytoskeleton, cytosol, peroxisome	57.99	58.65
CDX90294	Canola	peroxisome	58.36	57.51
CDY12103	Canola	peroxisome	58.36	57.3
GSMUA_AchrUn_...	Banana	golgi, vacuole	71.75	54.67
KRH51427	Soybean	mitochondrion	55.02	53.43
KRH60733	Soybean	peroxisome, plasma membrane, plastid	37.92	48.57
CDX72738	Canola	plastid	26.39	41.52

Protein Annotations

EnsemblPlants:TraesCS1B01G060900.1	EnsemblPlantsGene:TraesCS1B01G060900	Gene3D:3.40.50.1580	GO:GO:0003674	GO:GO:0003824	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009116	GO:GO:0009987	InterPro:Nucleoside_phosphorylase_d	InterPro:Nucleoside_phosphorylase_sf
PANTHER:PTHR21234	PANTHER:PTHR21234:SF34	PFAM:PF01048	SEG:seg	SUPFAM:SSF53167	MapMan:4.1.2.2.6.4.1

Description

No Description!

Coordinates

chr1B:-:45198203..45201443

Molecular Weight (calculated)

28099.8 Da

IEP (calculated)

4.416

GRAVY (calculated)

0.298

Length

269 amino acids

Sequence
(BLAST)

001: MAPPSSEEPA AAAAAAAAEP AGAGAISKVL VVIAMQTEAL PLVTRFQLVE AAADESIFPK GAPWTRYHGD YKGLHIDLVW PGKDPLLGVD SVGTVSAALV
101: TYACIQLLKP DLIINAGTAG GFKARGAGIG DVFLASDVAF HDRRIPIPVF DSYGVGARKT FATPNIVKEL NLKVGKLSTG DSLDMSPHDE TAILSNEATV
201: KDMEGAAVAY VADLFSTPAI FVKAVTDIVD GEKPTAEEFL QNLISVTMAL DQAVMQVVDF ISGKCISDL

Best Arabidopsis Sequence Match ( AT4G34840.1 )
(BLAST)

001: MEGVMGQVEK RPISTIVFIV AMQKEAQPLI NRLRLVEEVN TPFPKEVTWI MFKGMYKDLN INIVCPGKDS TLGVESVGTV PASLVTYASI LAIQPDLIIN
101: AGTAGGFKAK GACISDVYVV STVAFHDRRI PVPVLDIYGV GMRNTFPTPN LIKELNLKVG RLSTGDSMDM SPHDEESITA NDATVKDMEG AAVAYVADIF
201: KVPTILIKGV TDIVDGNRPT SEEFLENLAA VTAKLDESLT KVIDFISGKC LSDL

Arabidopsis Description

MTN25'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q7XA67]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.