Factsheet for Bra010725.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
peroxisome 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY12103	Canola	peroxisome	99.25	95.99
CDX90294	Canola	peroxisome	98.49	95.6
AT4G38800.1	Thale cress	peroxisome	86.79	86.14
VIT_03s0038g01440.t01	Wine grape	cytosol, peroxisome, plasma membrane	66.04	66.04
EES15308	Sorghum	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	61.89	65.34
KRH60729	Soybean	nucleus	64.91	64.91
PGSC0003DMT400004137	Potato	cytosol	65.28	64.31
Zm00001d049823_P001	Maize	extracellular	60.38	63.74
KRH51422	Soybean	nucleus	63.4	63.16
Os06t0112200-01	Rice	cytosol	61.13	62.55
Bra034657.1-P	Field mustard	peroxisome	62.64	62.41
Bra034660.1-P	Field mustard	peroxisome	62.64	62.41
TraesCS7A01G032500.1	Wheat	cytosol, peroxisome, plastid	55.09	61.6
TraesCS3B01G479600.1	Wheat	cytosol	52.83	60.61
TraesCS7D01G029100.1	Wheat	cytosol	59.25	59.7
TraesCS4A01G457100.1	Wheat	cytosol, peroxisome, plastid	53.96	59.34
CDX72738	Canola	plastid	37.74	58.48
TraesCS1B01G060900.1	Wheat	cytosol	59.25	58.36
Solyc01g111060.2.1	Tomato	plastid	64.53	55.52
TraesCS3D01G437600.1	Wheat	mitochondrion, plastid	53.21	53.41
KRH51427	Soybean	mitochondrion	53.58	51.26
Zm00001d031621_P003	Maize	cytosol, extracellular, peroxisome, plastid	60.75	51.11
HORVU7Hr1G004350.5	Barley	cytosol, peroxisome	60.0	50.8
GSMUA_AchrUn_...	Banana	golgi, vacuole	64.15	48.16
KRH60733	Soybean	peroxisome, plasma membrane, plastid	36.6	46.19

Protein Annotations

Gene3D:3.40.50.1580	MapMan:4.1.2.2.6.4.1	EnsemblPlantsGene:Bra010725	EnsemblPlants:Bra010725.1	EnsemblPlants:Bra010725.1-P	GO:GO:0000003
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0005886	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0008930
GO:GO:0009058	GO:GO:0009116	GO:GO:0009987	GO:GO:0010087	GO:GO:0016020	GO:GO:0016787
GO:GO:0019509	UniProt:M4D2M2	InterPro:Nucleoside_phosphorylase_d	InterPro:Nucleoside_phosphorylase_sf	PFAM:PF01048	PANTHER:PTHR21234
PANTHER:PTHR21234:SF34	SUPFAM:SSF53167	UniParc:UPI0002546B4C	:	:	:

Description

AT4G38800 (E=2e-126) ATMTN1, ATMTAN1, MTN1, MTAN1 | ATMTN1; catalytic/ methylthioadenosine nucleosidase

Coordinates

chrA08:+:16138794..16140392

Molecular Weight (calculated)

28417.3 Da

IEP (calculated)

4.733

GRAVY (calculated)

0.191

Length

265 amino acids

Sequence
(BLAST)

001: MGPHGDGDIE NVESESRRRP ISTVVFVIAM QAEAQPLVNK FGLSETSDSP LGKGLPWVLY HGLHKDLRIY VVCPGKDAAS GIARIDSVGT VPASLITFAS
101: IQALQPDILI NAGTCGAFKV KGANIGDVFL VSDVVFHDRR IPIPMFDLYG VGLRQAFSTP NLLKELNLKI GRLSTGDSLD MSTQDESLII ANDATLKDME
201: GAAVAYVAEL LKVPVIFLKA VTDLIDGDKP TAEEFLQNLA VVTSALEETA TKVINFIHGK TLSDL

Best Arabidopsis Sequence Match ( AT4G38800.1 )
(BLAST)

001: MAPHGDGLSD IEEPEVDAQS EILRPISSVV FVIAMQAEAL PLVNKFGLSE TTDSPLGKGL PWVLYHGVHK DLRINVVCPG RDAALGIDSV GTVPASLITF
101: ASIQALKPDI IINAGTCGGF KVKGANIGDV FLVSDVVFHD RRIPIPMFDL YGVGLRQAFS TPNLLKELNL KIGRLSTGDS LDMSTQDETL IIANDATLKD
201: MEGAAVAYVA DLLKIPVVFL KAVTDLVDGD KPTAEEFLQN LTVVTAALEG TATKVINFIN GRNLSDL

Arabidopsis Description

MTN1MTN1 [Source:UniProtKB/TrEMBL;Acc:A0A178UXV8]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.