Factsheet for TraesCS7A01G032500.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G457100.1	Wheat	cytosol, peroxisome, plastid	89.87	88.38
TraesCS7D01G029100.1	Wheat	cytosol	97.89	88.21
TraesCS1B01G060900.1	Wheat	cytosol	94.09	82.9
Os06t0112200-01	Rice	cytosol	85.65	78.38
EES15308	Sorghum	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	80.17	75.7
Zm00001d049823_P001	Maize	extracellular	75.95	71.71
HORVU7Hr1G004350.5	Barley	cytosol, peroxisome	92.41	69.97
VIT_03s0038g01440.t01	Wine grape	cytosol, peroxisome, plasma membrane	72.15	64.53
KRH51422	Soybean	nucleus	70.04	62.41
KRH60729	Soybean	nucleus	69.62	62.26
PGSC0003DMT400004137	Potato	cytosol	67.93	59.85
Zm00001d031621_P003	Maize	cytosol, extracellular, peroxisome, plastid	78.06	58.73
AT4G34840.1	Thale cress	cytosol	61.6	57.48
AT4G38800.1	Thale cress	peroxisome	63.71	56.55
Bra034657.1-P	Field mustard	peroxisome	62.87	56.02
Bra034660.1-P	Field mustard	peroxisome	62.87	56.02
CDY58815	Canola	peroxisome	62.45	55.64
CDY17489	Canola	cytoskeleton, cytosol, peroxisome	62.03	55.26
Bra010725.1-P	Field mustard	peroxisome	61.6	55.09
CDX90294	Canola	peroxisome	61.6	53.48
CDY12103	Canola	peroxisome	61.6	53.28
Solyc01g111060.2.1	Tomato	plastid	68.78	52.92
KRH51427	Soybean	mitochondrion	60.76	51.99
GSMUA_AchrUn_...	Banana	golgi, vacuole	74.26	49.86
KRH60733	Soybean	peroxisome, plasma membrane, plastid	43.88	49.52
CDX72738	Canola	plastid	27.85	38.6

Protein Annotations

EnsemblPlants:TraesCS7A01G032500.1	EnsemblPlantsGene:TraesCS7A01G032500	Gene3D:3.40.50.1580	GO:GO:0003674	GO:GO:0003824	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009116	GO:GO:0009987	InterPro:Nucleoside_phosphorylase_d	InterPro:Nucleoside_phosphorylase_sf
PANTHER:PTHR21234	PANTHER:PTHR21234:SF34	PFAM:PF01048	SEG:seg	SUPFAM:SSF53167	MapMan:4.1.2.2.6.4.1

Description

No Description!

Coordinates

chr7A:-:13798052..13801643

Molecular Weight (calculated)

24856.8 Da

IEP (calculated)

4.556

GRAVY (calculated)

0.239

Length

237 amino acids

Sequence
(BLAST)

001: MAPPSSDEPA AASGAGAISK VLVVIVPKGA PWTRYHGDYK GLHIDLVWPG KDPVLGVDSV GTVSAALVTY ASIQLLKPDL IINAGTAGGF KARGAGIGDV
101: FLASDVAFHD RRIPIPVFDS YGIGARKTFE TPNIVKELNL KVGKLSTGDS LDMSPHDETA ILSNEATVKD MEGAAVAYVA DLFSTPAIFV KAVTDIVDGE
201: KPTAEEFLQN LISVTMALDQ AVMQVVDFIS GKCISDL

Best Arabidopsis Sequence Match ( AT4G34840.1 )
(BLAST)

001: MEGVMGQVEK RPISTIVFIV AMQKEAQPLI NRLRLVEEVN TPFPKEVTWI MFKGMYKDLN INIVCPGKDS TLGVESVGTV PASLVTYASI LAIQPDLIIN
101: AGTAGGFKAK GACISDVYVV STVAFHDRRI PVPVLDIYGV GMRNTFPTPN LIKELNLKVG RLSTGDSMDM SPHDEESITA NDATVKDMEG AAVAYVADIF
201: KVPTILIKGV TDIVDGNRPT SEEFLENLAA VTAKLDESLT KVIDFISGKC LSDL

Arabidopsis Description

MTN25'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q7XA67]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.