CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytoskeleton, cytosol

Predictor Summary:

cytosol 2
peroxisome 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytoskeleton, cytosol, peroxisome
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY58815	Canola	peroxisome	97.37	97.37
Bra034657.1-P	Field mustard	peroxisome	96.62	96.62
Bra034660.1-P	Field mustard	peroxisome	96.62	96.62
AT4G34840.1	Thale cress	cytosol	83.08	87.01
PGSC0003DMT400004137	Potato	cytosol	66.92	66.17
VIT_03s0038g01440.t01	Wine grape	cytosol, peroxisome, plasma membrane	64.29	64.53
EES15308	Sorghum	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	60.53	64.14
KRH60729	Soybean	nucleus	62.78	63.02
Os06t0112200-01	Rice	cytosol	61.28	62.93
KRH51422	Soybean	nucleus	62.78	62.78
TraesCS7A01G032500.1	Wheat	cytosol, peroxisome, plastid	55.26	62.03
TraesCS4A01G457100.1	Wheat	cytosol, peroxisome, plastid	55.64	61.41
Zm00001d049823_P001	Maize	extracellular	57.89	61.35
TraesCS3B01G479600.1	Wheat	cytosol	52.63	60.61
TraesCS7D01G029100.1	Wheat	cytosol	59.02	59.7
CDX90294	Canola	peroxisome	60.9	59.34
CDY12103	Canola	peroxisome	60.9	59.12
TraesCS1B01G060900.1	Wheat	cytosol	58.65	57.99
Solyc01g111060.2.1	Tomato	plastid	66.54	57.47
TraesCS3D01G437600.1	Wheat	mitochondrion, plastid	51.88	52.27
HORVU7Hr1G004350.5	Barley	cytosol, peroxisome	59.4	50.48
KRH51427	Soybean	mitochondrion	50.38	48.38
Zm00001d031621_P003	Maize	cytosol, extracellular, peroxisome, plastid	57.14	48.25
KRH60733	Soybean	peroxisome, plasma membrane, plastid	37.97	48.1
GSMUA_AchrUn_...	Banana	golgi, vacuole	60.53	45.61
CDX72738	Canola	plastid	25.19	39.18

Protein Annotations

EnsemblPlants:CDY17489	EnsemblPlantsGene:GSBRNA2T00095675001	Gene3D:3.40.50.1580	GO:A0A078FWH3	GO:GO:0003674	GO:GO:0003824
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009116	GO:GO:0009987	InterPro:Nucleoside_phosphorylase_d
InterPro:Nucleoside_phosphorylase_sf	PANTHER:PTHR21234	PANTHER:PTHR21234:SF34	PFAM:PF01048	ProteinID:CDY17489	ProteinID:CDY17489.1
SEG:seg	SUPFAM:SSF53167	UniParc:UPI0004EE55BF	UniProt:A0A078FWH3	MapMan:4.1.2.2.6.4.1	:

Description

BnaC03g65740DBnaC03g65740D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FWH3]

Coordinates

chrLK032074:+:256636..258115

Molecular Weight (calculated)

28780.0 Da

IEP (calculated)

4.980

GRAVY (calculated)

0.124

Length

266 amino acids

Sequence
(BLAST)

001: MAANGDDFSN ASMENLMGHV EKRPIFTIVF IVAMQKEAQP LIERLRLVKE VNSPFPKEVA WILFKGMYKD LNINIVCPGK DSALGVDSVC TVPASLVTYA
101: SIQALQPDLI INAGTAGGFK GKGARICDVY IVSSSAFHDR RIPVPVLDLY GVGMRKAFPT PNLIKELNLK VGRLSTGDSM DMSPHDKESI TANDATVKDM
201: EGAAVAYVAD IFKVPTILIK GVTDIVDGNR PTSEEFLENL AAVTAQLDES ITKVIDFISG KCLSDL

Best Arabidopsis Sequence Match ( AT4G34840.1 )
(BLAST)

001: MEGVMGQVEK RPISTIVFIV AMQKEAQPLI NRLRLVEEVN TPFPKEVTWI MFKGMYKDLN INIVCPGKDS TLGVESVGTV PASLVTYASI LAIQPDLIIN
101: AGTAGGFKAK GACISDVYVV STVAFHDRRI PVPVLDIYGV GMRNTFPTPN LIKELNLKVG RLSTGDSMDM SPHDEESITA NDATVKDMEG AAVAYVADIF
201: KVPTILIKGV TDIVDGNRPT SEEFLENLAA VTAKLDESLT KVIDFISGKC LSDL

Arabidopsis Description

MTN25'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q7XA67]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.