Factsheet for Os06t0112200-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 1
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	cytosol, plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G032500.1	Wheat	cytosol, peroxisome, plastid	78.38	85.65
EES15308	Sorghum	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	81.47	84.06
TraesCS7D01G029100.1	Wheat	cytosol	85.33	84.03
TraesCS1B01G060900.1	Wheat	cytosol	84.17	81.04
TraesCS4A01G457100.1	Wheat	cytosol, peroxisome, plastid	74.9	80.5
TraesCS3B01G479600.1	Wheat	cytosol	71.04	79.65
Zm00001d049823_P001	Maize	extracellular	76.83	79.28
VIT_03s0038g01440.t01	Wine grape	cytosol, peroxisome, plasma membrane	74.52	72.83
HORVU7Hr1G004350.5	Barley	cytosol, peroxisome	84.56	69.97
PGSC0003DMT400004137	Potato	cytosol	70.66	68.03
KRH51422	Soybean	nucleus	69.5	67.67
KRH60729	Soybean	nucleus	69.11	67.55
TraesCS3D01G437600.1	Wheat	mitochondrion, plastid	68.34	67.05
Zm00001d031621_P003	Maize	cytosol, extracellular, peroxisome, plastid	80.31	66.03
AT4G34840.1	Thale cress	cytosol	62.55	63.78
AT4G38800.1	Thale cress	peroxisome	64.48	62.55
CDY58815	Canola	peroxisome	63.71	62.03
Bra034660.1-P	Field mustard	peroxisome	63.71	62.03
Bra034657.1-P	Field mustard	peroxisome	63.71	62.03
CDY17489	Canola	cytoskeleton, cytosol, peroxisome	62.93	61.28
Bra010725.1-P	Field mustard	peroxisome	62.55	61.13
Solyc01g111060.2.1	Tomato	plastid	72.2	60.71
CDX90294	Canola	peroxisome	62.55	59.34
CDY12103	Canola	peroxisome	62.55	59.12
GSMUA_AchrUn_...	Banana	golgi, vacuole	75.68	55.52
KRH51427	Soybean	mitochondrion	55.6	51.99
KRH60733	Soybean	peroxisome, plasma membrane, plastid	40.54	50.0
CDX72738	Canola	plastid	27.03	40.94

Protein Annotations

Gene3D:3.40.50.1580	MapMan:4.1.2.2.6.4.1	EntrezGene:4339898	EMBL:AB110165	EMBL:AK066172	EMBL:AK104797
ProteinID:BAA93034.1	ProteinID:BAF18506.1	ProteinID:BAS95802.1	ProteinID:EAZ35584.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0008782	GO:GO:0009116	GO:GO:0009987
GO:GO:0016787	GO:GO:0016798	InterPro:Nucleoside_phosphorylase_d	InterPro:Nucleoside_phosphorylase_sf	EnsemblPlantsGene:Os06g0112200	EnsemblPlants:Os06t0112200-01
PFAM:PF01048	PANTHER:PTHR21234	PANTHER:PTHR21234:SF34	UniProt:Q9LHZ0	SUPFAM:SSF53167	UniParc:UPI00000A2637
RefSeq:XP_015643737.1	SEG:seg	:	:	:	:

Description

Methylthioadenosine/S-adenosyl homocysteine nucleosidase, 5'-methylthioadenosine nucleosidase, MTA nucleosidasePurine and other phosphorylases, family 1 protein. (Os06t0112200-01)

Coordinates

chr6:+:692774..695655

Molecular Weight (calculated)

27458.0 Da

IEP (calculated)

4.487

GRAVY (calculated)

0.197

Length

259 amino acids

Sequence
(BLAST)

001: MAPPSDSDDS APIPAGAISK LLIVIAMQTE ALPLVNKFHL VEAEESIFPK GAPWIRYHGN YKGLHVDLVW PGKDPVLGVD CVGTVSAALV TYASIQSLKP
101: DLIINAGTAG GFKAKGADIG DVYLASDVAF HDRRIPIPVF DMYGIGTRKT FATPNILKEL NLKVGKLSTG DSLDMSPHDE SAILNNDATV KDMEGAAVAY
201: VADMFSTPAI FVKAVTDIVD GEKPTAEEFL QNLVAVTAAL DKAVTEVVDF ISGKCISDL

Best Arabidopsis Sequence Match ( AT4G34840.1 )
(BLAST)

001: MEGVMGQVEK RPISTIVFIV AMQKEAQPLI NRLRLVEEVN TPFPKEVTWI MFKGMYKDLN INIVCPGKDS TLGVESVGTV PASLVTYASI LAIQPDLIIN
101: AGTAGGFKAK GACISDVYVV STVAFHDRRI PVPVLDIYGV GMRNTFPTPN LIKELNLKVG RLSTGDSMDM SPHDEESITA NDATVKDMEG AAVAYVADIF
201: KVPTILIKGV TDIVDGNRPT SEEFLENLAA VTAKLDESLT KVIDFISGKC LSDL

Arabidopsis Description

MTN25'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q7XA67]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.