Factsheet for TraesCS3D01G437600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G479600.1	Wheat	cytosol	79.17	90.48
EES15308	Sorghum	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	65.15	68.53
TraesCS7D01G029100.1	Wheat	cytosol	68.18	68.44
Os06t0112200-01	Rice	cytosol	67.05	68.34
Zm00001d049823_P001	Maize	extracellular	61.36	64.54
VIT_03s0038g01440.t01	Wine grape	cytosol, peroxisome, plasma membrane	59.47	59.25
KRH51422	Soybean	nucleus	58.33	57.89
KRH60729	Soybean	nucleus	57.95	57.74
PGSC0003DMT400004137	Potato	cytosol	57.58	56.51
Zm00001d031621_P003	Maize	cytosol, extracellular, peroxisome, plastid	67.05	56.19
AT4G38800.1	Thale cress	peroxisome	54.92	54.31
Bra010725.1-P	Field mustard	peroxisome	53.41	53.21
AT4G34840.1	Thale cress	cytosol	51.14	53.15
Bra034657.1-P	Field mustard	peroxisome	53.03	52.63
Bra034660.1-P	Field mustard	peroxisome	53.03	52.63
CDY58815	Canola	peroxisome	52.65	52.26
CDY17489	Canola	cytoskeleton, cytosol, peroxisome	52.27	51.88
CDX90294	Canola	peroxisome	53.41	51.65
CDY12103	Canola	peroxisome	53.41	51.46
Solyc01g111060.2.1	Tomato	plastid	57.95	49.68
KRH51427	Soybean	mitochondrion	47.73	45.49
GSMUA_AchrUn_...	Banana	golgi, vacuole	60.61	45.33
KRH60733	Soybean	peroxisome, plasma membrane, plastid	31.44	39.52
CDX72738	Canola	plastid	23.48	36.26

Protein Annotations

EnsemblPlants:TraesCS3D01G437600.1	EnsemblPlantsGene:TraesCS3D01G437600	Gene3D:3.40.50.1580	GO:GO:0003674	GO:GO:0003824	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009116	GO:GO:0009987	InterPro:Nucleoside_phosphorylase_d	InterPro:Nucleoside_phosphorylase_sf
ncoils:Coil	PANTHER:PTHR21234	PANTHER:PTHR21234:SF34	PFAM:PF01048	SUPFAM:SSF53167	MapMan:4.1.2.2.6.4.1

Description

No Description!

Coordinates

chr3D:-:548684329..548687147

Molecular Weight (calculated)

28100.1 Da

IEP (calculated)

8.609

GRAVY (calculated)

0.084

Length

264 amino acids

Sequence
(BLAST)

001: MLGRSGIFAI SRGPYGPRVS KYSKPYTCRR AAPPLNAMAS AMQAEMLPLV HRFQLLEVPT GESIFPKGAP WARYCGNYKG LHIDLVWPGK DPALGVDSVG
101: TLSAALVTHA SIQFLKPDLI INAGTGSGFK AKGAGVGDVF LKSDVVFHDR RIPIPVLGLY GNGARKTFVG KLSTGDSRDM SPHDVLEILS NGATLKDMEG
201: AAVAHVADMF STPAIFVKAV TEIVDGEKPR AEEFLQNLTA ATKALDQAVA EVVNFVCGKC LSDL

Best Arabidopsis Sequence Match ( AT4G34840.1 )
(BLAST)

001: MEGVMGQVEK RPISTIVFIV AMQKEAQPLI NRLRLVEEVN TPFPKEVTWI MFKGMYKDLN INIVCPGKDS TLGVESVGTV PASLVTYASI LAIQPDLIIN
101: AGTAGGFKAK GACISDVYVV STVAFHDRRI PVPVLDIYGV GMRNTFPTPN LIKELNLKVG RLSTGDSMDM SPHDEESITA NDATVKDMEG AAVAYVADIF
201: KVPTILIKGV TDIVDGNRPT SEEFLENLAA VTAKLDESLT KVIDFISGKC LSDL

Arabidopsis Description

MTN25'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q7XA67]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.