CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra010725.1-P	Field mustard	peroxisome	58.48	37.74
CDX90294	Canola	peroxisome	59.06	37.0
CDY12103	Canola	peroxisome	58.48	36.5
AT4G38800.1	Thale cress	peroxisome	53.8	34.46
VIT_03s0038g01440.t01	Wine grape	cytosol, peroxisome, plasma membrane	46.2	29.81
KRH60729	Soybean	nucleus	46.2	29.81
KRH51422	Soybean	nucleus	45.61	29.32
KRH60733	Soybean	peroxisome, plasma membrane, plastid	34.5	28.1
PGSC0003DMT400004137	Potato	cytosol	43.86	27.88
TraesCS7A01G032500.1	Wheat	cytosol, peroxisome, plastid	38.6	27.85
Zm00001d049823_P001	Maize	extracellular	40.35	27.49
EES15308	Sorghum	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	40.35	27.49
TraesCS4A01G457100.1	Wheat	cytosol, peroxisome, plastid	38.6	27.39
TraesCS3B01G479600.1	Wheat	cytosol	36.84	27.27
Os06t0112200-01	Rice	cytosol	40.94	27.03
TraesCS7D01G029100.1	Wheat	cytosol	40.94	26.62
TraesCS1B01G060900.1	Wheat	cytosol	41.52	26.39
KRH51427	Soybean	mitochondrion	42.11	25.99
CDY58815	Canola	peroxisome	39.18	25.19
CDY17489	Canola	cytoskeleton, cytosol, peroxisome	39.18	25.19
Solyc01g111060.2.1	Tomato	plastid	43.27	24.03
TraesCS3D01G437600.1	Wheat	mitochondrion, plastid	36.26	23.48
HORVU7Hr1G004350.5	Barley	cytosol, peroxisome	41.52	22.68
Zm00001d031621_P003	Maize	cytosol, extracellular, peroxisome, plastid	41.52	22.54
GSMUA_AchrUn_...	Banana	golgi, vacuole	44.44	21.53

Protein Annotations

EnsemblPlants:CDX72738	EnsemblPlantsGene:GSBRNA2T00100337001	Gene3D:3.40.50.1580	GO:A0A078CCL8	GO:GO:0003674	GO:GO:0003824
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009116	GO:GO:0009987	InterPro:Nucleoside_phosphorylase_d
InterPro:Nucleoside_phosphorylase_sf	PANTHER:PTHR21234	PANTHER:PTHR21234:SF34	PFAM:PF01048	ProteinID:CDX72738	ProteinID:CDX72738.1
SEG:seg	SUPFAM:SSF53167	UniParc:UPI0004EE2460	MapMan:4.1.2.2.6.4.1	:	:

Description

BnaC07g47600D

Coordinates

chrLK031796:+:2885139..2886313

Molecular Weight (calculated)

18959.9 Da

IEP (calculated)

6.742

GRAVY (calculated)

0.009

Length

171 amino acids

Sequence
(BLAST)

001: MEMKRLTSNW RRVFVDVSPR SSSSSRCKRR LNLWSDSLIL LRALISPFSP SDLLQSNKSL SSSLIPMFDL YGVGLRQALD MSTQDESLII ANDATLNDME
101: GSAVAYVAEL LKVPVMFLKA VTDLIDGDKP TAQEFLQNLS LVTSALEETA TKVTNFINGK NPFRPLTIIS T

Best Arabidopsis Sequence Match ( AT4G38800.1 )
(BLAST)

001: MAPHGDGLSD IEEPEVDAQS EILRPISSVV FVIAMQAEAL PLVNKFGLSE TTDSPLGKGL PWVLYHGVHK DLRINVVCPG RDAALGIDSV GTVPASLITF
101: ASIQALKPDI IINAGTCGGF KVKGANIGDV FLVSDVVFHD RRIPIPMFDL YGVGLRQAFS TPNLLKELNL KIGRLSTGDS LDMSTQDETL IIANDATLKD
201: MEGAAVAYVA DLLKIPVVFL KAVTDLVDGD KPTAEEFLQN LTVVTAALEG TATKVINFIN GRNLSDL

Arabidopsis Description

MTN1MTN1 [Source:UniProtKB/TrEMBL;Acc:A0A178UXV8]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.