Factsheet for TraesCS3B01G479600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G437600.1	Wheat	mitochondrion, plastid	90.48	79.17
Os06t0112200-01	Rice	cytosol	79.65	71.04
EES15308	Sorghum	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	77.06	70.92
TraesCS1B01G060900.1	Wheat	cytosol	80.95	69.52
Zm00001d049823_P001	Maize	extracellular	72.73	66.93
VIT_03s0038g01440.t01	Wine grape	cytosol, peroxisome, plasma membrane	69.7	60.75
KRH51422	Soybean	nucleus	68.4	59.4
KRH60729	Soybean	nucleus	67.97	59.25
PGSC0003DMT400004137	Potato	cytosol	68.4	58.74
Zm00001d031621_P003	Maize	cytosol, extracellular, peroxisome, plastid	77.06	56.51
AT4G34840.1	Thale cress	cytosol	59.74	54.33
AT4G38800.1	Thale cress	peroxisome	62.34	53.93
Bra034657.1-P	Field mustard	peroxisome	61.47	53.38
Bra034660.1-P	Field mustard	peroxisome	61.47	53.38
CDY58815	Canola	peroxisome	61.04	53.01
Bra010725.1-P	Field mustard	peroxisome	60.61	52.83
CDY17489	Canola	cytoskeleton, cytosol, peroxisome	60.61	52.63
Solyc01g111060.2.1	Tomato	plastid	68.83	51.62
CDX90294	Canola	peroxisome	60.61	51.28
CDY12103	Canola	peroxisome	60.61	51.09
KRH51427	Soybean	mitochondrion	56.28	46.93
GSMUA_AchrUn_...	Banana	golgi, vacuole	70.13	45.89
KRH60733	Soybean	peroxisome, plasma membrane, plastid	41.13	45.24
CDX72738	Canola	plastid	27.27	36.84

Protein Annotations

EnsemblPlants:TraesCS3B01G479600.1	EnsemblPlantsGene:TraesCS3B01G479600	Gene3D:3.40.50.1580	GO:GO:0003674	GO:GO:0003824	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009116	GO:GO:0009987	InterPro:Nucleoside_phosphorylase_d	InterPro:Nucleoside_phosphorylase_sf
ncoils:Coil	PANTHER:PTHR21234	PANTHER:PTHR21234:SF34	PFAM:PF01048	SUPFAM:SSF53167	MapMan:4.1.2.2.6.4.1

Description

No Description!

Coordinates

chr3B:-:727474873..727477816

Molecular Weight (calculated)

24746.1 Da

IEP (calculated)

6.352

GRAVY (calculated)

0.170

Length

231 amino acids

Sequence
(BLAST)

001: MQAEMLPLVH RFQLLEVPAC ESIFPKGAPW ARYCGNYKGL HIDLVWPGKD PALGVDSVGT LSAALVTYAS IQFLKPDLII NAGTASCFKA KGAGMGDVFL
101: ASDVVFHDRR VPIPVLGLYG NGARKTFLTP NMLKELNLKV GKLSTGDSRD MSPHDVLEIL SNGATLKDME GAAVAHVADM FSTPAIFVKA VTEIVDGEKP
201: RAEEFLQNLT AATKALDQAV AEVVNFISGK C

Best Arabidopsis Sequence Match ( AT4G38800.1 )
(BLAST)

001: MAPHGDGLSD IEEPEVDAQS EILRPISSVV FVIAMQAEAL PLVNKFGLSE TTDSPLGKGL PWVLYHGVHK DLRINVVCPG RDAALGIDSV GTVPASLITF
101: ASIQALKPDI IINAGTCGGF KVKGANIGDV FLVSDVVFHD RRIPIPMFDL YGVGLRQAFS TPNLLKELNL KIGRLSTGDS LDMSTQDETL IIANDATLKD
201: MEGAAVAYVA DLLKIPVVFL KAVTDLVDGD KPTAEEFLQN LTVVTAALEG TATKVINFIN GRNLSDL

Arabidopsis Description

MTN1MTN1 [Source:UniProtKB/TrEMBL;Acc:A0A178UXV8]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.