CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, plasma membrane

Predictor Summary:

nucleus 1
plastid 2
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome, plasma membrane, plastid
Any Predictor:	peroxisome, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH51427	Soybean	mitochondrion	63.33	48.01
KRH60729	Soybean	nucleus	58.1	46.04
KRH51422	Soybean	nucleus	58.1	45.86
TraesCS7A01G032500.1	Wheat	cytosol, peroxisome, plastid	49.52	43.88
TraesCS4A01G457100.1	Wheat	cytosol, peroxisome, plastid	50.0	43.57
TraesCS3B01G479600.1	Wheat	cytosol	45.24	41.13
Os06t0112200-01	Rice	cytosol	50.0	40.54
VIT_03s0038g01440.t01	Wine grape	cytosol, peroxisome, plasma membrane	50.48	40.0
EES15308	Sorghum	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	47.62	39.84
PGSC0003DMT400004137	Potato	cytosol	50.95	39.78
AT4G34840.1	Thale cress	cytosol	48.1	39.76
TraesCS7D01G029100.1	Wheat	cytosol	49.05	39.16
Zm00001d049823_P001	Maize	extracellular	46.67	39.04
Bra034660.1-P	Field mustard	peroxisome	48.57	38.35
Bra034657.1-P	Field mustard	peroxisome	48.57	38.35
CDY58815	Canola	peroxisome	48.1	37.97
CDY17489	Canola	cytoskeleton, cytosol, peroxisome	48.1	37.97
TraesCS1B01G060900.1	Wheat	cytosol	48.57	37.92
AT4G38800.1	Thale cress	peroxisome	47.14	37.08
Bra010725.1-P	Field mustard	peroxisome	46.19	36.6
CDX90294	Canola	peroxisome	46.19	35.53
CDY12103	Canola	peroxisome	46.19	35.4
Solyc01g111060.2.1	Tomato	plastid	51.43	35.06
CDX72738	Canola	plastid	28.1	34.5
HORVU7Hr1G004350.5	Barley	cytosol, peroxisome	50.48	33.87
Zm00001d031621_P003	Maize	cytosol, extracellular, peroxisome, plastid	47.62	31.75
TraesCS3D01G437600.1	Wheat	mitochondrion, plastid	39.52	31.44
GSMUA_AchrUn_...	Banana	golgi, vacuole	50.95	30.31

Protein Annotations

EMBL:ACUP02002137	EnsemblPlants:KRH60733	EnsemblPlantsGene:GLYMA_04G006000	Gene3D:3.40.50.1580	GO:GO:0003674	GO:GO:0003824
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009116	GO:GO:0009987	InterPro:Nucleoside_phosphorylase_d
InterPro:Nucleoside_phosphorylase_sf	PANTHER:PTHR21234	PANTHER:PTHR21234:SF34	PFAM:PF01048	ProteinID:KRH60733	ProteinID:KRH60733.1
SUPFAM:SSF53167	UniParc:UPI0006EDF75F	UniProt:A0A0R0K1P3	MapMan:4.1.2.2.6.4.1	:	:

Description

hypothetical protein

Coordinates

chr4:-:474479..476934

Molecular Weight (calculated)

22804.7 Da

IEP (calculated)

4.020

GRAVY (calculated)

0.474

Length

210 amino acids

Sequence
(BLAST)

001: MNWIWAGNDP TLGVDSIGTI PSALATYAAV LALQPYLIIN AGTAGGFKIF DLYGIGLRKV FETPNLVKEL NLKEFIVFVQ NLNVKQYLCI FLVAKLSTGG
101: SLDMTEQDES SIIANDATVI DMEGAAIAYV ADILKVPAIF IKAVNSIVDG DKAIVEEFLQ NLEALTAVLD LNKLLILLME SAYLNFDNSI SPYPLVEEYI
201: STGRTANAFT

Best Arabidopsis Sequence Match ( AT4G34840.1 )
(BLAST)

001: MEGVMGQVEK RPISTIVFIV AMQKEAQPLI NRLRLVEEVN TPFPKEVTWI MFKGMYKDLN INIVCPGKDS TLGVESVGTV PASLVTYASI LAIQPDLIIN
101: AGTAGGFKAK GACISDVYVV STVAFHDRRI PVPVLDIYGV GMRNTFPTPN LIKELNLKVG RLSTGDSMDM SPHDEESITA NDATVKDMEG AAVAYVADIF
201: KVPTILIKGV TDIVDGNRPT SEEFLENLAA VTAKLDESLT KVIDFISGKC LSDL

Arabidopsis Description

MTN25'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q7XA67]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.