Factsheet for TraesCS4A01G457100.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

plastid 2
peroxisome 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, peroxisome, plastid
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G032500.1	Wheat	cytosol, peroxisome, plastid	88.38	89.87
TraesCS7D01G029100.1	Wheat	cytosol	89.63	82.13
TraesCS1B01G060900.1	Wheat	cytosol	87.97	78.81
Os06t0112200-01	Rice	cytosol	80.5	74.9
EES15308	Sorghum	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	77.18	74.1
Zm00001d049823_P001	Maize	extracellular	73.03	70.12
HORVU7Hr1G004350.5	Barley	cytosol, peroxisome	88.38	68.05
VIT_03s0038g01440.t01	Wine grape	cytosol, peroxisome, plasma membrane	70.95	64.53
KRH51422	Soybean	nucleus	68.88	62.41
KRH60729	Soybean	nucleus	68.46	62.26
PGSC0003DMT400004137	Potato	cytosol	66.81	59.85
Zm00001d031621_P003	Maize	cytosol, extracellular, peroxisome, plastid	77.59	59.37
AT4G34840.1	Thale cress	cytosol	61.0	57.87
Bra034657.1-P	Field mustard	peroxisome	61.83	56.02
Bra034660.1-P	Field mustard	peroxisome	61.83	56.02
CDY17489	Canola	cytoskeleton, cytosol, peroxisome	61.41	55.64
CDY58815	Canola	peroxisome	61.41	55.64
AT4G38800.1	Thale cress	peroxisome	61.0	55.06
Bra010725.1-P	Field mustard	peroxisome	59.34	53.96
Solyc01g111060.2.1	Tomato	plastid	67.22	52.6
CDX90294	Canola	peroxisome	59.34	52.38
KRH51427	Soybean	mitochondrion	60.17	52.35
CDY12103	Canola	peroxisome	59.34	52.19
KRH60733	Soybean	peroxisome, plasma membrane, plastid	43.57	50.0
GSMUA_AchrUn_...	Banana	golgi, vacuole	71.37	48.73
CDX72738	Canola	plastid	27.39	38.6

Protein Annotations

EnsemblPlants:TraesCS4A01G457100.1	EnsemblPlantsGene:TraesCS4A01G457100	Gene3D:3.40.50.1580	GO:GO:0003674	GO:GO:0003824	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009116	GO:GO:0009987	InterPro:Nucleoside_phosphorylase_d	InterPro:Nucleoside_phosphorylase_sf
PANTHER:PTHR21234	PANTHER:PTHR21234:SF34	PFAM:PF01048	SUPFAM:SSF53167	MapMan:4.1.2.2.6.4.1	:

Description

No Description!

Coordinates

chr4A:+:722410147..722413452

Molecular Weight (calculated)

25783.7 Da

IEP (calculated)

4.742

GRAVY (calculated)

0.124

Length

241 amino acids

Sequence
(BLAST)

001: MNYAGTSWSS DFFGCSQANA FLCRCTPNRF PKGAPWTRYH GDYKGLHIDL VWPGKDPVLG VDSVGTVSAA LVTYASIQLL KPDLIINAGT AGGFKARGAG
101: IGDVFLASDV AFHDRRIPIP VFDSYGIGAR KTFETPNIVK ELNLKVGKLS TGDSLDMSPH DETAILSNEA TVKDMEGAAV AYVADLFSTP AIFVKAVTDI
201: VDGEKPTAEE FLQNLISVTM ALDQAVLQVV DFISGKCISD L

Best Arabidopsis Sequence Match ( AT4G34840.1 )
(BLAST)

001: MEGVMGQVEK RPISTIVFIV AMQKEAQPLI NRLRLVEEVN TPFPKEVTWI MFKGMYKDLN INIVCPGKDS TLGVESVGTV PASLVTYASI LAIQPDLIIN
101: AGTAGGFKAK GACISDVYVV STVAFHDRRI PVPVLDIYGV GMRNTFPTPN LIKELNLKVG RLSTGDSMDM SPHDEESITA NDATVKDMEG AAVAYVADIF
201: KVPTILIKGV TDIVDGNRPT SEEFLENLAA VTAKLDESLT KVIDFISGKC LSDL

Arabidopsis Description

MTN25'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q7XA67]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.