CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
peroxisome 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra010725.1-P	Field mustard	peroxisome	95.6	98.49
CDY12103	Canola	peroxisome	96.34	95.99
AT4G38800.1	Thale cress	peroxisome	83.88	85.77
VIT_03s0038g01440.t01	Wine grape	cytosol, peroxisome, plasma membrane	64.1	66.04
EES15308	Sorghum	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	60.07	65.34
KRH60729	Soybean	nucleus	63.0	64.91
PGSC0003DMT400004137	Potato	cytosol	63.37	64.31
Zm00001d049823_P001	Maize	extracellular	58.61	63.74
KRH51422	Soybean	nucleus	61.54	63.16
Os06t0112200-01	Rice	cytosol	59.34	62.55
CDY58815	Canola	peroxisome	60.07	61.65
TraesCS7A01G032500.1	Wheat	cytosol, peroxisome, plastid	53.48	61.6
CDY17489	Canola	cytoskeleton, cytosol, peroxisome	59.34	60.9
TraesCS3B01G479600.1	Wheat	cytosol	51.28	60.61
TraesCS7D01G029100.1	Wheat	cytosol	57.51	59.7
TraesCS4A01G457100.1	Wheat	cytosol, peroxisome, plastid	52.38	59.34
CDX72738	Canola	plastid	37.0	59.06
TraesCS1B01G060900.1	Wheat	cytosol	57.51	58.36
Solyc01g111060.2.1	Tomato	plastid	62.64	55.52
TraesCS3D01G437600.1	Wheat	mitochondrion, plastid	51.65	53.41
Zm00001d031621_P003	Maize	cytosol, extracellular, peroxisome, plastid	59.34	51.43
KRH51427	Soybean	mitochondrion	52.01	51.26
HORVU7Hr1G004350.5	Barley	cytosol, peroxisome	58.24	50.8
GSMUA_AchrUn_...	Banana	golgi, vacuole	62.27	48.16
KRH60733	Soybean	peroxisome, plasma membrane, plastid	35.53	46.19

Protein Annotations

EnsemblPlants:CDX90294	EnsemblPlantsGene:GSBRNA2T00150871001	Gene3D:3.40.50.1580	GO:A0A078DP62	GO:GO:0003674	GO:GO:0003824
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009116	GO:GO:0009987	InterPro:Nucleoside_phosphorylase_d
InterPro:Nucleoside_phosphorylase_sf	PANTHER:PTHR21234	PANTHER:PTHR21234:SF34	PFAM:PF01048	ProteinID:CDX90294	ProteinID:CDX90294.1
SUPFAM:SSF53167	UniParc:UPI0004EF3335	MapMan:4.1.2.2.6.4.1	:	:	:

Description

BnaA08g16900D

Coordinates

chrLK031862:-:1112974..1114814

Molecular Weight (calculated)

29274.5 Da

IEP (calculated)

4.733

GRAVY (calculated)

0.264

Length

273 amino acids

Sequence
(BLAST)

001: MGPHGDGDIE KVESESRRRP ISTVVFVIAM QAEAQPLVNK FGLSETSDSP LGKGLPWVLY HGLHKDLRIY VVCPGKDAAS GISILIALVS SWIDSVGTVP
101: ASLITFASIQ ALQPDILINA GTCGAFKVKG ANIGDVFLVS DVVFHDRRIP IPMFDLYGVG LRQAFSTPNL LKELNLKIGR LSTGDSLDMS TQDESLIIAN
201: DATLKDMEGA AVAYVAELLK VPVIFLKAVT DLIDGDKPTA EEFLQNLAVV TSALEETATK VINFIHGKTL SDL

Best Arabidopsis Sequence Match ( AT4G38800.1 )
(BLAST)

001: MAPHGDGLSD IEEPEVDAQS EILRPISSVV FVIAMQAEAL PLVNKFGLSE TTDSPLGKGL PWVLYHGVHK DLRINVVCPG RDAALGIDSV GTVPASLITF
101: ASIQALKPDI IINAGTCGGF KVKGANIGDV FLVSDVVFHD RRIPIPMFDL YGVGLRQAFS TPNLLKELNL KIGRLSTGDS LDMSTQDETL IIANDATLKD
201: MEGAAVAYVA DLLKIPVVFL KAVTDLVDGD KPTAEEFLQN LTVVTAALEG TATKVINFIN GRNLSDL

Arabidopsis Description

MTN1MTN1 [Source:UniProtKB/TrEMBL;Acc:A0A178UXV8]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.